Gene Franean1_2049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2049 
Symbol 
ID5670450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2466833 
End bp2467573 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content75% 
IMG OID641240971 
Productmethyltransferase type 12 
Protein accessionYP_001506392 
Protein GI158313884 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.690149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.594586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCTGGG AGTGGGACGC GGCCGCCTAC GGCCGGCTGC GGCTGCCGCA CGAGCTGTGG 
GGGCAGCGCA CGCTTGCCCG GCTCGCGCTG ACCGGCAGCG AGACCGTGCT GGACGCCGGC
TGCGGCACCG GGCGGGACAC CGCGGCGCTG CTCGAGGCGC TCCCGCGCGG CCGGGTCATC
GCCGTCGACG CATCGGCGAG CATGCTCGAC CAGCTCCGTG CGCGGCTGCC TGACACCGAA
CGGCTCACCA TTCTCGCGGC GGACCTGCTT GACCCGCTGC CGATCGCCGA GCCGGTCGAC
GCCGTGCTGA GCGTGGCCGT CCTGCACTGG ATAGCCGATC ATCAGCGGGT GTTCGACAAC
CTCGCGGCGA TCCTGCGGCC GGGGGGCCGG CTCTCGGTCG ACTGCGGCGG CCACGGCAAC
ATCGCCTCCG TCCAGGCGGC CCTGGCGGCG GTGCTCGGAG AGGTTCCGCA GGTGTGGAAC
TTCGCGGCGC CGGCCGAGAC GGAGCGGCGC CTCGCCGCGG CCGGCTTCGT CGACATCGAG
GCCCGGCTGC GCGCCGAGAC CGCCCAGTTC GACGGTCCGG CTGCGTTGCA CGACTACCTG
GAGACGGTCG TGCTCGGCGC GCACCTGGTC AGGCTGGGCG CCGACGAGCG CGCGGCCTTC
GTCCGGGCGG TCGCCGAGCG GCTGCCCCGG CCCGCCGTCG ACTACGTCCG CCTCGAGGTA
CACGCCCGCC GCGCGGCCTG A
 
Protein sequence
MAWEWDAAAY GRLRLPHELW GQRTLARLAL TGSETVLDAG CGTGRDTAAL LEALPRGRVI 
AVDASASMLD QLRARLPDTE RLTILAADLL DPLPIAEPVD AVLSVAVLHW IADHQRVFDN
LAAILRPGGR LSVDCGGHGN IASVQAALAA VLGEVPQVWN FAAPAETERR LAAAGFVDIE
ARLRAETAQF DGPAALHDYL ETVVLGAHLV RLGADERAAF VRAVAERLPR PAVDYVRLEV
HARRAA