Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2019 |
Symbol | |
ID | 5670420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 2425919 |
End bp | 2427802 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641240940 |
Product | ketopantoate reductase ApbA/PanE |
Protein accession | YP_001506362 |
Protein GI | 158313854 |
COG category | [H] Coenzyme transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1893] Ketopantoate reductase [COG2897] Rhodanese-related sulfurtransferase |
TIGRFAM ID | [TIGR00745] 2-dehydropantoate 2-reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.691708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.348803 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCA GATACGTGAT CATCGGAGCG GGTGCCGTCG GGGGGACCGT CGCCGCCCAG CTGCACGATG CCGGTGTCGA CGTCGTCCTC GTCGCCCGCG GGGCGAACCT GGCGGCGCTG CGCGCCGACG GCCTGCGCTA CCTCCGTCCC GACGCCGACC GTCCCGACTG GGACCGGCGC CTCCCCCTGC CGGTGGCCGG CGGCCCCGAC GAGGTCGACC TGCGCCCCGG CGACGTGCTG GTGCTCTCCG CCAAGTCCCA GGACACCGAG GCGCTCGTCG CCCAGTGGGC GTGGCGGCCG GTGCACCCGG GCGGCACCGC CGCCGAACAG CTGCCGATCC TGCTGCTGCA GAACGGGGTG GAGAACGCCC GGGCCGCGCT GCGCCGGTTC GACACCGTCA TCGACGCGGT CGTGATCATC CCGTCATCCC ATTCGACGCC CGGAACGGTG GTCTCGCCGG GCGCCCCGCT GGCGGGCGCC TTCTACCTGG GACATGCCCC GCGCGGCGAG AGCGAGGCGG CCGAGCGGAT CGCCGCCGAC CTGCGGCGCG CGCAGTTCGC GGTGAAGGTC GTTCCGGACG TCGAACGGTG GAAGGTCGGC AAGCTGCTCG GGAACCTCGC CTACAACCTC GACGCCGTCT ACCCGCCCAG CGCGGCCCGC GACCGGCTCG GCGCGGCGCT GGTCACCGAG GCCCGCACGG TGCTGGCCGC CGCCGGGGTC GAGGTGACCG ACGTGCTCAC CGGCGACACC GGTCTCGACC TGTCCGGCCT GGTCCTGCAC GACATCCCCG GCCACTCCCG CCAGGGCAGC TCGACGTGGC AGAGCCTGGC CCGCGGCGCC ACGGTCGAGT CCGACTTCCT CAACGGCGAG ATCGCGCTCC TCGCCCGCCT GCACGGGACG TCCGCGCCGC TGAACGCGGG CGTTCAGCGG CGCATCGCCC TCGCCGCTCT GGGCGGGTCG AGCCCCGGCG GCCTCGGCGA GGACGACCTC ACCGCCCTGC TCGCGTCCGC GTCACCCGCC GACGGCGACA GTCTCCGTGA GGTGCTCGTC GACGCCAAGC GGCTGCACGA CCTGGTGGCG ACGGGGCCGG CGCCGGTGCT GCTCGACGTC CGCTGGGCGC TCGGCGACCC GCACGGGCGG GAGCACTACC TGGCCGGTCA CCTCCCGGGC GCCGTCTACG TCGACCTGGA CACCGAGCTG GCCGCCGCGC CGGGCGGGAC CGCGGGGCGC CACCCGCTGC CCGCCGTCGA GGACCTGCAG CGGGCGGCCC GGCGCTGGGG TGTGTCGGCC GGCCGGCCCG TCGTCGTGTA CGACGACAAC GGCGGGCTGG CCGCCGCGCG GGCCTGGTGG CTGCTGCGCT GGGCAGGCCT CTCGGACGTC CGCATCCTCG ACGGCGCGCT CGGTGCCTGG CGCGAGGCCG GGTTCCCGCT CGCCACCGGC GACGTCGTCC CCGCCCCGGG CGACGTGGTG CTCAGTGCCG GTCACCTGCC CACCCTCGAC GCGGACGGCG CGGCCCGAAC CGCCCGCGAC GGCGTGCTGC TGGACGCGCG CGCCGCGGAG CGCTTCCGCG GCGAGGTGGA GCCGGTCGAC CCGCGCGCGG GCCACATCCC CGGGGCGGTC AGCGCGCCCA CCGGCGACAA CCTGGACGAA CATGGCCGTT TCCTCACCCC GGACCGGCTG CGGGAGCGCT TCGCCGCCCT CGGGACGTCC GCCGGCGGCC AGCCGGTCGG TGGCCAGCCC GTCGGCGTGT ACTGCGGCTC CGGGGTGACC GCCGCGCACG AGATCGCGGC CCTGGCCACC GCCGGCATCG AGGCCGCGCT CTACCCGGGC TCGTGGTCGG CCTGGTCCGC CGACCCGCAG CGCCCCGCCG CCACCGGGTC ATGA
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Protein sequence | MTARYVIIGA GAVGGTVAAQ LHDAGVDVVL VARGANLAAL RADGLRYLRP DADRPDWDRR LPLPVAGGPD EVDLRPGDVL VLSAKSQDTE ALVAQWAWRP VHPGGTAAEQ LPILLLQNGV ENARAALRRF DTVIDAVVII PSSHSTPGTV VSPGAPLAGA FYLGHAPRGE SEAAERIAAD LRRAQFAVKV VPDVERWKVG KLLGNLAYNL DAVYPPSAAR DRLGAALVTE ARTVLAAAGV EVTDVLTGDT GLDLSGLVLH DIPGHSRQGS STWQSLARGA TVESDFLNGE IALLARLHGT SAPLNAGVQR RIALAALGGS SPGGLGEDDL TALLASASPA DGDSLREVLV DAKRLHDLVA TGPAPVLLDV RWALGDPHGR EHYLAGHLPG AVYVDLDTEL AAAPGGTAGR HPLPAVEDLQ RAARRWGVSA GRPVVVYDDN GGLAAARAWW LLRWAGLSDV RILDGALGAW REAGFPLATG DVVPAPGDVV LSAGHLPTLD ADGAARTARD GVLLDARAAE RFRGEVEPVD PRAGHIPGAV SAPTGDNLDE HGRFLTPDRL RERFAALGTS AGGQPVGGQP VGVYCGSGVT AAHEIAALAT AGIEAALYPG SWSAWSADPQ RPAATGS
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