Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1991 |
Symbol | |
ID | 5670392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2394325 |
End bp | 2394966 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641240912 |
Product | hypothetical protein |
Protein accession | YP_001506334 |
Protein GI | 158313826 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00244164 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.308842 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTTCCGG GCGGTCGGCG CGTCCCGCGG GCGGTTGCCG TGAGACGCGG ACGGCCCGTC GGAAGGAGGG AGCGGGCCGA ACGACCAGAA CCTAGTACCG CAATCGGACA TCTCGAACTG TCCACGCCGG AGGATCCAGT GATCTCGTCG AGTTTTTGGT TCGTTGCCCC TGTTTTTTTG GAGTGTTGTC GCCGTAGGGG TGGAGCTTCG GGCGTTTCAG CGCCCGGACT TGGAACGGGG GCCGGAGCGC GATCCGCCGC CGGAGCGGCG GGCCCGCGAG CGCGTGCCGA CGTCCACCTG CCGGGCGGGG CCGGCGCCGG CGGCGACGTT CTCCAGGTCG GCGGTGATGC TGCTGTTGAT GAGCCCGACC GTCCGGTCAC GGTCGCCGTC GTCGAGGCCT TCGAGCAGGC TGTGTATCAG GCTCACGATG TTCCTCCACG CTGCGGGGCG ATCTCGGGGT TCGTGCGTCT GCTGCCCGGA CCGAGCGTGT TAAAGCGTGC GATCGCCGCT TTTTCCCGGC GACAAGGGTC CCGGCGCCAG GAGCCTGGCG GCCAGGAGCC TGGTGGCAAG GACCCTGGTG GCGAGGATCA GGGCGCCGGC GAGAGGCCCC CGTCGAGGTT GATGCCGACG CCGGTCAGGT AA
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Protein sequence | MVPGGRRVPR AVAVRRGRPV GRRERAERPE PSTAIGHLEL STPEDPVISS SFWFVAPVFL ECCRRRGGAS GVSAPGLGTG AGARSAAGAA GPRARADVHL PGGAGAGGDV LQVGGDAAVD EPDRPVTVAV VEAFEQAVYQ AHDVPPRCGA ISGFVRLLPG PSVLKRAIAA FSRRQGSRRQ EPGGQEPGGK DPGGEDQGAG ERPPSRLMPT PVR
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