Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1944 |
Symbol | |
ID | 5670345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2335352 |
End bp | 2337574 |
Gene Length | 2223 bp |
Protein Length | 740 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641240865 |
Product | methylmalonyl-CoA mutase |
Protein accession | YP_001506287 |
Protein GI | 158313779 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.132442 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCGA TCCCCGACTT CGCCGAGATC GCGCTCGGAG CACCCAGCGG CGCGGACGCC GACGAGGCCC AGTGGCGGGT CGCGCTCGAG CAGGCCACCG GCAAGGACGC CGACGCGCTG ACCTGGGACA CCCCCGAGGG CATCGCGGTG AAGCCGCTGT ACACCGCGGC CGACACGGCC GGCCTGGACT TCCTCGGCAC CTACCCGGGC ATCGCCCCCT ACCTGCGCGG CCCGTACCCG GCGATGTACG TGACCCAGCC GTGGACGATC CGCCAGTACG CGGGGTTCTC CACCGCGGCC GAGTCGAACG CCTTCTACCG ACGCAACCTG GCCGCCGGCC AGAAGGGCCT CTCGGTGGCC TTCGACCTGC CGACCCACCG CGGGTACGAC AGCGACCACC CGCGGGTCAC CGGCGACGTG GGCATGGCCG GCGTGGCCAT CGACTCGATC TACGACATGC GCCAGCTCTT CGACGGCATC CCGCTGGACC GGATGAGCGT GTCGATGACC ATGAACGGCG CGGTGCTGCC GGTCCTGGCG CTGTACATCG TCGCCGCCGA GGAACAGGGG GTGGCACCGG AGCAGCTCGC CGGCACCATC CAGAACGACA TCCTCAAAGA GTTCATGGTC CGCAACACCT ACATCTACCC GCCGCAGCCG TCGATGCAGA TCATCTCGGA CATCTTCGCG TACACGTCGA AGCGGATGCC GCGATTCAAC TCGATCTCCA TCTCCGGCTA CCACATGCAG GAGGCGGGCG CGACCGCCGA CCTGGAGCTC GCCTACACGC TGGCGGACGG CGTCGAGTAC ATCCGGGCGG GTCTGGGTGC CGGCCTGGAG ATCGACGCCT TCGCCCCCCG GCTGTCGTTC TTCTGGGCGA TCGGCATGAA CTTCTTCATG GAAGTCGCCA AGATGCGCGC GGCGCGCCTG CTGTGGGCGC GGTTGGTGAA CCAGTTCGGC CCGACCAGCG CCCGTTCGAC GTCGCTGCGG ACGCACTCGC AGACCTCCGG ATGGTCGCTG ACCGCCCAGG ACGTCTTCAA CAACGTCGTG CGCACCTGCG TCGAGGCGAT GGCCGCCACC CAGGGGCACA CCCAGTCGCT GCACACCAAC GCCCTCGACG AGGCGCTGGC GCTGCCCACC GACTTCTCCG CCCGCATCGC GCGCAACACC CAGCTGCTGC TCCAGCAGGA GTCCGGTACC ACCCGGGTCG TCGACCCGTG GGGCGGCAGC CACTATGTCG AGCGGCTCAC CTACGACCTG GCCCGCAAGG CCTGGGCGCA CATCACCGAG GTCGAGTCGA CCGGCGGGAT GGCGCAGGCG ATCGACGCCG GCATCCCGAA GATGCGCATC GAGGAGGCGG CGGCGCGCAC CCAGGCCCGC ATCGACGCCG GACGCCAGCC GCTCGTCGGG GTCAACAAGT ACCGGGTGGA CGCGGATGAG GCCATCGACG TCCTGAAGGT CGACAACTCG GCGGTCCGGG TCGGTCAGAT CGAGAAGCTG CGCCGGCTGC GCGAGGAACG TGACACCGCC GCCGTCGAGT CGGCGCTGCA CGCGCTGACC GCCGCGGCCG ACGCGGCCCG CGACGGCAGC CGGCCGTCCG ACCTGGGGCA CAACCTGCTC GCGCTGGCAG TCGACGCCGC CCGCGCCAAG GCGACCGTGG GTGAGATCTC CGACGCCCTG GAGAAGGTGT ACGGGCGGCA CTCCGGTCAG ATCCGTACGA TCTCGGGTGT GTACCGGGAT GAGGCCGGGC CAGCCGGCAA CATCGTCGCC GCCCGCGAGG CCGCGGCGGC CTTCGAGCGG GCCGAGGGCC GGCGCCCACG GATCCTCGTC GCGAAGATGG GGCAGGACGG GCACGACCGC GGCCAGAAGG TGATCGCCAC GGCCTTCGCC GACATCGGCT TCGACGTGGA CGTCGGCCCG CTGTTCCAGA CGCCGGCCGA GGTGGCCCGC CAGGCCGTCG AGGCGGACGT CCAGATCATC GGCGTGTCCT CGCTCGCCGC CGGGCACCTC ACGCTGGTCC CGGCGCTGAA GGAGGAGCTG GCGGCGCTCG AACGCGACGA CATCCTCGTC GTCGTCGGCG GGGTCATCCC GCCGCAGGAC TTCGACGCGC TGCGCGCCGC CGGTGCCGCC GCGATCTTCC CGCCTGGCAC GGTCATCGCG GACGCGGCGA TCGAGCTGCT GGCCACGCTG TCCGACCAGC TCGGCCACAC CGCGGCGCCT TGA
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Protein sequence | MSSIPDFAEI ALGAPSGADA DEAQWRVALE QATGKDADAL TWDTPEGIAV KPLYTAADTA GLDFLGTYPG IAPYLRGPYP AMYVTQPWTI RQYAGFSTAA ESNAFYRRNL AAGQKGLSVA FDLPTHRGYD SDHPRVTGDV GMAGVAIDSI YDMRQLFDGI PLDRMSVSMT MNGAVLPVLA LYIVAAEEQG VAPEQLAGTI QNDILKEFMV RNTYIYPPQP SMQIISDIFA YTSKRMPRFN SISISGYHMQ EAGATADLEL AYTLADGVEY IRAGLGAGLE IDAFAPRLSF FWAIGMNFFM EVAKMRAARL LWARLVNQFG PTSARSTSLR THSQTSGWSL TAQDVFNNVV RTCVEAMAAT QGHTQSLHTN ALDEALALPT DFSARIARNT QLLLQQESGT TRVVDPWGGS HYVERLTYDL ARKAWAHITE VESTGGMAQA IDAGIPKMRI EEAAARTQAR IDAGRQPLVG VNKYRVDADE AIDVLKVDNS AVRVGQIEKL RRLREERDTA AVESALHALT AAADAARDGS RPSDLGHNLL ALAVDAARAK ATVGEISDAL EKVYGRHSGQ IRTISGVYRD EAGPAGNIVA AREAAAAFER AEGRRPRILV AKMGQDGHDR GQKVIATAFA DIGFDVDVGP LFQTPAEVAR QAVEADVQII GVSSLAAGHL TLVPALKEEL AALERDDILV VVGGVIPPQD FDALRAAGAA AIFPPGTVIA DAAIELLATL SDQLGHTAAP
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