Gene Franean1_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1939 
Symbol 
ID5670340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2329343 
End bp2329906 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content73% 
IMG OID641240860 
Productpeptidoglycan binding domain-containing protein 
Protein accessionYP_001506282 
Protein GI158313774 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.19325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGCTC TCCAGCGACG GCTGGTCGAG CTGGGCTACT GGCTCGGCGA GCCCAACGGG 
ATCTACGGAG CCCTGACGGT GCAGGCCGTC CTCGCCGCCC AGAAGGTCGC CGGACTGGAG
CGGGACGGCT TGGTGGGCCC GGCCACCTGG GCGTCGCTCC GGCAGGGCCC CCGACCGCTG
GCCGTCACCG GTTCGGGCCT GGCGCTGGAG GTCGATGTCG CGCGCCAGCT GCTGCTCGTC
GTCCAGGACG GATCGGTCCG CCAGATCCTC AACACCTCGA CCGGGACGGA GCGCTGGTAC
GAGGTGCGCG GCCAGCGCCT CCTCGCCGAC ACCCCGCGGG GTACCTGGCA TGTGTACCGG
CAGGTCGACG GCGTGGACCC GGGCCCACTC GGCGGCCTGT ACCGGCCGAA GTACTTCCAC
ACCGACGGGA TCGCGGTGCA CGGCTACGTG TCCGTGCCGG GCCGCGCGGC GTCCCACGGC
TGCGTTCGGG TCACCAACGA GGCGATGGAC TGGCTGTGGG CGGCGGGTAT CGGCGCGATC
GGGACGACGG TGCTGGTCCG CTGA
 
Protein sequence
MLALQRRLVE LGYWLGEPNG IYGALTVQAV LAAQKVAGLE RDGLVGPATW ASLRQGPRPL 
AVTGSGLALE VDVARQLLLV VQDGSVRQIL NTSTGTERWY EVRGQRLLAD TPRGTWHVYR
QVDGVDPGPL GGLYRPKYFH TDGIAVHGYV SVPGRAASHG CVRVTNEAMD WLWAAGIGAI
GTTVLVR