Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1939 |
Symbol | |
ID | 5670340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2329343 |
End bp | 2329906 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641240860 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_001506282 |
Protein GI | 158313774 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.19325 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTCGCTC TCCAGCGACG GCTGGTCGAG CTGGGCTACT GGCTCGGCGA GCCCAACGGG ATCTACGGAG CCCTGACGGT GCAGGCCGTC CTCGCCGCCC AGAAGGTCGC CGGACTGGAG CGGGACGGCT TGGTGGGCCC GGCCACCTGG GCGTCGCTCC GGCAGGGCCC CCGACCGCTG GCCGTCACCG GTTCGGGCCT GGCGCTGGAG GTCGATGTCG CGCGCCAGCT GCTGCTCGTC GTCCAGGACG GATCGGTCCG CCAGATCCTC AACACCTCGA CCGGGACGGA GCGCTGGTAC GAGGTGCGCG GCCAGCGCCT CCTCGCCGAC ACCCCGCGGG GTACCTGGCA TGTGTACCGG CAGGTCGACG GCGTGGACCC GGGCCCACTC GGCGGCCTGT ACCGGCCGAA GTACTTCCAC ACCGACGGGA TCGCGGTGCA CGGCTACGTG TCCGTGCCGG GCCGCGCGGC GTCCCACGGC TGCGTTCGGG TCACCAACGA GGCGATGGAC TGGCTGTGGG CGGCGGGTAT CGGCGCGATC GGGACGACGG TGCTGGTCCG CTGA
|
Protein sequence | MLALQRRLVE LGYWLGEPNG IYGALTVQAV LAAQKVAGLE RDGLVGPATW ASLRQGPRPL AVTGSGLALE VDVARQLLLV VQDGSVRQIL NTSTGTERWY EVRGQRLLAD TPRGTWHVYR QVDGVDPGPL GGLYRPKYFH TDGIAVHGYV SVPGRAASHG CVRVTNEAMD WLWAAGIGAI GTTVLVR
|
| |