| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1935 |
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| Symbol | |
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| ID | 5670336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2319000 |
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| End bp | 2323646 |
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| Gene Length | 4647 bp |
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| Protein Length | 1548 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641240856 |
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| Product | glutamate synthase (ferredoxin) |
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| Protein accession | YP_001506278 |
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| Protein GI | 158313770 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.891386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.412086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACTG CGCAAGGTCT CTACGACCCC ACCTTCGAAC ACGATGCCTG TGGCGTCGGC
TTCGTCGTCG ATGTGCACGG CCGGCGCAGT CATGAGCTGG TCGATCAGGG TCTGACCGTG
CTGCGCAATC TCGATCACCG GGGCGCGTCG GGCAGCGATC CCGATACCGG TGACGGCGCG
GGCATCCTCG TCCAGGTCCC GGACGGCTTC TTCCGTGACG TCGTCGAGTT CGCGCTGCCC
GCGCCCGGTC GGTACGCGGT GGGCACCGTG TTCCTGCCGC AGGTCGCCGG CGAGCGTGAC
GACGCCGTCC GGACCATCAG CCGGATCGTC CGCCAGGAGG GCCTGCGTGT CCTGGGGTGG
CGGGAGGTGC CGACCGTCAG CCACATCGTC GGCCACGCCG CCCGTGAGGT CGAGCCGTGG
ATGCGGCAGA TCTTCCTCGC GCTGCCCGGC ACGCCGACGC GGCCGCGCGT CGCGCCCGTC
ACGGCCGACG GAGCCGAGAT CGCCGGTGCT GCCGGGGCCG CTGACGGCGT AGGCACGGCG
GTCCTCGCCG TCGATCCGTC CGCGTCCGCG CCCGGGCCCG ACGGCTTCGA CGCCATGGAG
CTCGAGCGCC GCGCGTTCTG CGTGCGCAAG CGGGTGCGCC GGGAGACCGG CGTGTACATG
CCCTCGCTGT CGTCGCGGAC CATCGTCTAC AAGGGGATGC TGACCACCCA TCAGCTTTCC
GCCTACTTCC CGGACCTCGA CGACCCGCGG TTCGCCAGCG CCATCGCGCT GGTCCACAGC
CGGTTCTCGA CGAACACGTT CCCGAGCTGG CCGCTGGCCC ACCCGTACCG GCTGATCGCC
CACAACGGCG AGATCAACAC GGTGCGCGGC AACCGCAACT GGATGCGGGC GCGGGAGGCG
CTGCTCGCCA GCGACCTCAT CCCCGGCGAC CTGTCCCGGC TGTTCCCGAT CTGCGCGGAC
GGCGCCAGCG ACTCGGCCAG CTTCGACGAG GTGCTGGAGC TGCTGCACCT GGGCGGCCGG
TCGCTGCCGC ACGCGGTGCT GATGATGATC CCCGAGGCGT GGGAGAACCA CGAGGAGATG
GACGCGGCCC GCCGGGCCTT CTACCGCTTC CACTCCGCGC TCATGGAGCC CTGGGACGGG
CCGGCGTCCA TCGCGTTCAC CGATGGCACG GTCATCGGCG CGGTGCTCGA CCGCAACGGC
CTGCGTCCGT CCCGGTACTG GGTGACCGAC GACGGCCTGG TCGTGATGGC CTCCGAGGTC
GGCGTGCTCG ACATCCCGCC GCACCGGGTG GTGCGCAAGG GGCGCCTGCA GCCGGGCCGG
ATGTTCCTCG TCGACACCGC GCAGGGCCGG ATCGTCAGCG ACGACGAGAT CAAGTCCGAG
CTGGCCTCCG CCGCCCCGTA CGAGGAGTGG CTGCACGCCG GGCTGATCTC CCTCGACGAC
CTGCCCGAGC GCGAGCACGT CCTGTACGGG CACTCGTCCG TCATGCGCCG CCAGCAGGTG
TTCGGCTACT CCCAGGAGGA GCTGCGGATC ATCATCGGCC CGATGGCCCG TACCGGGGCC
GAGCCGATCG GGTCGATGGG CACCGACACC CCGGTCGCGG TGCTCTCCAG CCGGCCGCGG
CTGCTGTTCG ACTACTTCAC CCAGCTGTTC GCGCAGGTCA CGAACCCGCC GCTGGACGCC
ATCCGGGAGG AGCTGGTCAC CAGCCTCGGG CGCACGCTGG GCCCGGAGGG GAACCTGCTC
GCGCCGTCCC CGGCGTCGGC GCGCATGGTG CACCTGCCGT TCCCGGTGAT CAGTAACACC
CAGCTCGCGC GGATCATCGG CATCAACGAC GACGGTGACA TGCCCGGGTT CGCCTCGGTG
ACCGTGCGTG GTCTCTACGA CGTCGCCGGC GGCGGGGCGG CGCTGGCCGC GCGGCTGGCG
GAGATCTGTT CCGGCGTCAG CGAGGCGATC GCCGACGGTG CCCGCATTGT GGTCCTCTCG
GACCGCGACT CCGATGAGCG CAAGGCACCG ATCCCGTCGC TGCTGCTGAC GGCCGCCGTC
CACCACCACC TGATCCGGGA GAAGACCCGG ACGAAGGTCG GCCTGATCGT CGAGTGCGGC
GACGCCCGGG AGGTCCACCA CATCGCCCTG CTCACCGGGT ACGGCGCGGC GGCGGTCAAC
CCGTACCTGG CGTTCGAGTC GATCGACGAC CTCCTCGCCC GCGGCGAGCT CACCGGCATC
GAGCGCGAGC AGGCCGAGAA GAACCTGATC AAGGGCCTCG GCAAGGGTCT GCTCAAGGTG
ATGTCCAAGA TGGGTATCTC GACGGTGGCG AGCTACACCG GCGCCCAGGT CTTCGAGGCG
ATCGGGCTCG CCCAGGAGCT CGTCGACCAG TACTTCGTCG GCACCCCGAG CCGGCTGGAC
GGCGTCGGCA TCGACGTCAT CGCGGAGGAG GTCGCGGCCC GCCACCGGCG CGCCTACCCG
ACCGTCCCGT CCGAGCTGGC GCACCGCACC CTCGAGGTCG GCGGCGAGTA CCAGTGGCGG
CGCGAGGGCG AGCTGCACCT GTTCAACCCG GAGACGGTCT TCCTGCTCCA GCACTCCACC
CGCAGCCGTC AGTACGACCT GTTCCGTCAG TACACCGCGA AGGTCGACGG CCTCTCCCGG
GAGAACGCGA CGCTGCGCGG GCTGTTCGAG CTGCGTACCC GCGGGCGGGC GCCGATCCCG
ATCGACCAGG TCGAGCCGGT GTCGGAGATC GTGAAGCGGT TCGCGACCGG CGCCATGTCG
TACGGCTCGA TCAGCGCCGA GGCGCACGAG ACGCTGGCGA TCGCGATGAA CCGCCTGGGT
GGGAAGTCGA ACACCGGTGA GGGCGGCGAG GACGCGCGCC GGTTCCTTCC CGACGAGAAC
GGCGACCTGC GCCGCTCGGC GGTCAAGCAG GTCGCGAGCG GCCGGTTCGG CGTGACCAGC
GAGTACCTGG CGAACGCGGA CGACATCCAG ATCAAGATGG CGCAGGGCGC GAAGCCGGGG
GAGGGCGGCC AGCTGCCCGG GCACAAGGTG TACCCGTGGA TCGCGAAGAC CCGGCACTCC
ACGCCGGGCG TGGGTCTGAT CTCGCCGCCG CCGCACCACG ACATCTACTC GATCGAGGAT
CTCGCCCAGC TCATCCACGA CCTGAAGAAC GCCAACCCGA AGGCCCGGGT GCACGTCAAG
CTCGTCGCCG AGGTCGGCGT CGGGACGGTG GCCGCGGGAG TCTCCAAGGC GCACGCCGAC
GTCGTGCTCA TCTCCGGCCA CGACGGCGGC ACCGGCGCCT CCCCACTGAC CTCGCTCAAG
CATGCCGGCG CCCCCTGGGA GCTCGGGCTC GCCGAGACCC AGCAGACGCT GCTGCTCAAC
GGCCTGCGGG ACCGGATCGT CGTCCAGGTC GACGGCCAGA TGAAGACCGG GCGGGACGTC
GTCGTCGGCG CGCTCCTCGG CGCCGAGGAG TTCGGTTTCG CCACGGCGCC GCTTGTCGTC
GCGGGCTGCG TGATGATGCG CGTCTGCCAC CTCGACACCT GCCCCGTCGG CGTGGCGACG
CAGAACCCGG AGCTGCGCGC GCGTTTCACC GGCCGGCCGG AGTTCGTCGA GGCGTTCTTC
ACCTTCATCG CCGAGGAGGT CCGGGAGCAC CTGGCCGCCC TCGGGCTGCG CAGCATCGCC
GAGGCGGTGG GGCGGGTCGA CCTGCTCGAC GCCCGCGCCG CCATCGACCA CTGGAAGGCC
TCCGGGCTCG ACATCACCCC GCTGCTGCAC ACCCCGGAGC GGCCGTTCGG CGGCTCGCTG
CACTGCACCG CCAGCCAGGA CCACGGGCTC GACAAGGCCC TGGACAACTC CCTGATCCAG
CTCTGCGAGG GCGCGATCGA GGACGGCCGT CCGGTCTGGC TGGAGATGCC GATCCGCAAC
GTCAACCGGA CGGTCGGGAC CATGCTCGGC TACGAGGTGA CGAAGCGGTA CGGGGCCGCC
GGCCTGCCCG ACGACACGAT CTCGCTGCGG TTCACCGGCT CCGCGGGGCA GAGCTTCGGG
GCGTTCGTGC CGCGCGGGAT GACCCTCACC CTCGAGGGCG ACGTCAACGA CTACACCGGC
AAGGGGCTGT CCGGCGGGCG GATCATCGTC TTCCCGCCGA AGGAGTCGCC GCTGCGCGCC
GAGGAGAACA CCGTCGCGGG CAACGTGCTG CTCTACGGCG CGACCGCCGG CGAGGCGTTC
TTCCGCGGCA TCGTCGGCGA GCGGTTCTGC GTGCGCAACT CCGGAGCCAC CGCGGTCGTC
GAGGGGGTCG GCGACCACGG CTGCGAGTAC ATGACCGGCG GTACGGTGGT GGTTCTCGGG
CCGATCGGGC GCAACTTCGC GGCCGGCATG AGTGGCGGCG TGGCCTACCT GTACAAGCCG
GTCAGCCAGC GCATCAACAC CGAGATGGTG GACGTCGATC CGCTCGACGA CGACGACCGG
TCCGCGCTGC GCGGCATCGT CGAGAAGCAC TACCGGGAAA CCGGTTCGGC CATCGCGTCC
CGGTTGATCG CCAACTGGGC CGGCGCCCAG GAGGACTTCG TCAAGGTCAT GCCGAAGGAC
TACAAGCGGG TACTGGCGGC GATGCGGAGC GCCGAGGAGC AGGGCCTGTC GGTGGAGGAT
GCGATCATGG CCGCCGCGCG AGTCTGA
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| Protein sequence | MPTAQGLYDP TFEHDACGVG FVVDVHGRRS HELVDQGLTV LRNLDHRGAS GSDPDTGDGA
GILVQVPDGF FRDVVEFALP APGRYAVGTV FLPQVAGERD DAVRTISRIV RQEGLRVLGW
REVPTVSHIV GHAAREVEPW MRQIFLALPG TPTRPRVAPV TADGAEIAGA AGAADGVGTA
VLAVDPSASA PGPDGFDAME LERRAFCVRK RVRRETGVYM PSLSSRTIVY KGMLTTHQLS
AYFPDLDDPR FASAIALVHS RFSTNTFPSW PLAHPYRLIA HNGEINTVRG NRNWMRAREA
LLASDLIPGD LSRLFPICAD GASDSASFDE VLELLHLGGR SLPHAVLMMI PEAWENHEEM
DAARRAFYRF HSALMEPWDG PASIAFTDGT VIGAVLDRNG LRPSRYWVTD DGLVVMASEV
GVLDIPPHRV VRKGRLQPGR MFLVDTAQGR IVSDDEIKSE LASAAPYEEW LHAGLISLDD
LPEREHVLYG HSSVMRRQQV FGYSQEELRI IIGPMARTGA EPIGSMGTDT PVAVLSSRPR
LLFDYFTQLF AQVTNPPLDA IREELVTSLG RTLGPEGNLL APSPASARMV HLPFPVISNT
QLARIIGIND DGDMPGFASV TVRGLYDVAG GGAALAARLA EICSGVSEAI ADGARIVVLS
DRDSDERKAP IPSLLLTAAV HHHLIREKTR TKVGLIVECG DAREVHHIAL LTGYGAAAVN
PYLAFESIDD LLARGELTGI EREQAEKNLI KGLGKGLLKV MSKMGISTVA SYTGAQVFEA
IGLAQELVDQ YFVGTPSRLD GVGIDVIAEE VAARHRRAYP TVPSELAHRT LEVGGEYQWR
REGELHLFNP ETVFLLQHST RSRQYDLFRQ YTAKVDGLSR ENATLRGLFE LRTRGRAPIP
IDQVEPVSEI VKRFATGAMS YGSISAEAHE TLAIAMNRLG GKSNTGEGGE DARRFLPDEN
GDLRRSAVKQ VASGRFGVTS EYLANADDIQ IKMAQGAKPG EGGQLPGHKV YPWIAKTRHS
TPGVGLISPP PHHDIYSIED LAQLIHDLKN ANPKARVHVK LVAEVGVGTV AAGVSKAHAD
VVLISGHDGG TGASPLTSLK HAGAPWELGL AETQQTLLLN GLRDRIVVQV DGQMKTGRDV
VVGALLGAEE FGFATAPLVV AGCVMMRVCH LDTCPVGVAT QNPELRARFT GRPEFVEAFF
TFIAEEVREH LAALGLRSIA EAVGRVDLLD ARAAIDHWKA SGLDITPLLH TPERPFGGSL
HCTASQDHGL DKALDNSLIQ LCEGAIEDGR PVWLEMPIRN VNRTVGTMLG YEVTKRYGAA
GLPDDTISLR FTGSAGQSFG AFVPRGMTLT LEGDVNDYTG KGLSGGRIIV FPPKESPLRA
EENTVAGNVL LYGATAGEAF FRGIVGERFC VRNSGATAVV EGVGDHGCEY MTGGTVVVLG
PIGRNFAAGM SGGVAYLYKP VSQRINTEMV DVDPLDDDDR SALRGIVEKH YRETGSAIAS
RLIANWAGAQ EDFVKVMPKD YKRVLAAMRS AEEQGLSVED AIMAAARV
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