Gene Franean1_1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1857 
Symbol 
ID5670259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2230452 
End bp2230811 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content75% 
IMG OID641240778 
Producthypothetical protein 
Protein accessionYP_001506201 
Protein GI158313693 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0534563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00174056 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCTCGTGC ACCAAGGAAG TGTTTTCAAC CTGGCCCCGG CCCTGCCGGC GCCCACCACA 
GAGGCGGAGC CGTCCGGCGA CCCCGCCTCC GCCTCCCCCG TCGCGCGGCG GAGGTGTCCG
CACAGTCCGC CCTGCCCGAC GGCCGACAGC GCCGACCACG ACGCGGCGAG AGTCACCAGC
AGACACTGCG ACCAGGGCTG GAGTCTGCTC TGCAACGGGG TGATCCTCTT CGAGGACACG
GGGGAGATCC TGCCCACCGG TCGCACCGTG GAGCCGCGGC GACCGTTGCC GCGGCCCGGG
TGCGTACCCC GGCCGCCCGC GCCGCGTCGA GGGGCGGTCG CCGCGCCGAC ACCGGTCTGA
 
Protein sequence
MLVHQGSVFN LAPALPAPTT EAEPSGDPAS ASPVARRRCP HSPPCPTADS ADHDAARVTS 
RHCDQGWSLL CNGVILFEDT GEILPTGRTV EPRRPLPRPG CVPRPPAPRR GAVAAPTPV