| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1853 |
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| Symbol | |
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| ID | 5670255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2224599 |
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| End bp | 2225306 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641240774 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001506197 |
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| Protein GI | 158313689 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.147437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0157174 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTCTCC CTCCCGCGCC GGTCACCGTC CAGGCCGTCA TCTTCGATCT CGACGGTGTG
CTGATCGATT CTGAGCAGGT GTGGGATGAG GTCCGGCGGG CCTTCGTGGC CGAGCGCGGG
GGCCGCTGGG CGGCCGACAG CACCGCCCTG ATGATGGGGA TGTCCACCGC GGAGTGGTCC
GGGTACCTGC TCGAGCTGGG TGCCGGTGAC AGCGCGGAGG AGATCGCGGC CGAGGTACGC
AGCCGGGTCG CGGCACGCTA CGGCGACGCG CCGCCGCTGC TCCCGGGCGC CGTGGCGGCG
GTGCGGGCGC TTGCGGAGCG CTGGCCACTC GGCGTGGCGA GCTCGTCCCC GCGGACGCTC
ATCGAGCTGG TGCTGGACCG CGCCGGCCTG GCGGGGGAGT TCCGCCAGGT CGTCTCCTCC
GAGGAGGTCG CCCGGGGCAA GCCCGCGCCC GACGTATACC TGGAAGCCGT CCGCCGGATG
CGGGTGCCGG ACGGCACGGC GGCCGGTGTG GTGGTCGCCG TCGAGGACTC GGCGAACGGC
CTGCGGGCGG CCTCGGCCGC GGGCCTCGCC GTCGTGGCCG TCCCGAACGA GCACTTCCCG
CCCGACGCGG ACGCTCTGGC GCTGGCGTCG GCCCGCGTCG ACGGAGTCGC GGGGCTCACC
GCCCAGGTCG TCCTCGCCGC CGCGGAGCAC CACACGATCC GCACCTGA
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| Protein sequence | MALPPAPVTV QAVIFDLDGV LIDSEQVWDE VRRAFVAERG GRWAADSTAL MMGMSTAEWS
GYLLELGAGD SAEEIAAEVR SRVAARYGDA PPLLPGAVAA VRALAERWPL GVASSSPRTL
IELVLDRAGL AGEFRQVVSS EEVARGKPAP DVYLEAVRRM RVPDGTAAGV VVAVEDSANG
LRAASAAGLA VVAVPNEHFP PDADALALAS ARVDGVAGLT AQVVLAAAEH HTIRT
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