| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1813 |
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| Symbol | |
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| ID | 5670215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2176173 |
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| End bp | 2177984 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641240734 |
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| Product | hypothetical protein |
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| Protein accession | YP_001506157 |
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| Protein GI | 158313649 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex
[COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0953081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0279118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGCCCAG TCCCTGCGCC GACCGGCGGC GTGCCGCGCC AGGCCAGCCT GGCAGAGCTC
GGCCGGCCGC TGTCGGACCT GACGTTCGTC GTCGTCGACC TGGAGACCAC CGGCGGCTCG
CCGGCGACGA GCGAGATCAC CGAGATCGGC GCCGTGCGGG TTCGGGGCGG CCAGATCCTC
GGTGAGATGT CGAGCCTGGT CCGGCCGTCG GCCCCCATCC CGGCCTTCAT CTCCGTGCTC
ACCGGCATCA CCGGCGCCAT GGTCGCCACC GCCCCGGGCA TCGGCGAGGT CGTGCCGACG
TTCCTGGAGT TCGCCCGGGG CGCGGTGCTC GTGGCTCACA ACGCCCCGTT CGACCTCGGC
TTCCTGCGCG CCGCCGCCAC GGCGTGCGGC TACCCGGCCC CGGCCTGGGA ACATCTCGAC
ACGGTGCGGA TCGCGCGCCG CGTCATCAGC CGCGACGAGA CCCGCGACTG CCGCCTGTCC
TCCCTGGCGG CCCTCTTCGG TAGCGCGACC CAGCCGAACC ACCGGGCGCT GGCCGATGCC
CGCGCGACGG TCGACGTCCT GCACGGGCTG TTCGAGCGGC TGGGCAACCT GGGTGTCACC
ACGATCGAGG ATCTGCACGA GTACAGCGCG CGGGTCTCCC CCGCCCAGCG GCGCAAGCGG
CACCTCGCCG ACGACCTGCC CACCGGCCCG GGGGTCTACG TGTTCCGCGA CGGCACGGGG
CGCCCGCTGT ACGTCGGCAC GTCCCGGTCG GTCCGCTCCC GGGTGCGTAC CTACTTCACG
GCCAGCGAGC CCCGCACCCG GATGGCGGAG ATGGTCGCGA TCGCCGAGCG GGTCGACGCG
ATCGAGTGCG CGCACGCGCT CGAGGCGGAG GTGCGCGAGC TGCGGCTGAT CGCCGAGTAC
AAACCGCCGT ACAACCGCCG CTCCCGGTTC CCCGAGCGGG CCGTCTACCT GCGGCTCACC
GACGAGCCGT TCCCCCGGCT CTCCCGGGTC CGCTCCGTCG GCGACGGTGT GACGTCGCTG
GGGCCGTTCG GCAGCGCGGC GGCGGCCGAG TCGGCGGCCA CGGCGCTGCT GGAGGCGATC
CCGCTGCGCC AGTGCTCGAC CCGGCTCTCG CCGCGCCGTC CGACGGCCGC GTGCGCGCTG
GCCGAGCTGG GGCGCTGCGG CGCGCCGTGC GACGGCCGGG AGGGGGTCGC CGAGTACGGC
CAACACGTCG CCACGGCGCG CGGCGCGATG ACCGCCGATC CGCGTCCCGT CGTGGACGTG
CTGGAGCGGC GCATCGCGCG GCTGTCCGCC GACCAGCGCT ATGAGGAGGC CGCCGGGGTC
CGCGACCGGC TCGCGGCCTA CGTGCGGGCC GTCGCGCGCA TGCAGCGGCT GACGGCGCTG
ACCTGCATCG ACGAGTTGGT CGCCGCCGCG CCGACCGCCG ACGCCGGGTG GGATCTCGCC
GTCGTCCGCC GTGGCCGGCT GGTGTCCGCG GCGTCGGTGC CGCGCGGCAC CGACCCGAGG
CCCTGGGTCG ACGCCGTGGT CGCCAGCGCG GAGACCGTCC GACCACTGCC CGGCCCCACC
CCGTGCGCCT CGGTCGAGGA GACGGAACGG ATCGGGCGGT GGCTGGCCGG GCCCGGCGTG
CGCCTGGTCC GGCTGGACGG CGAGTGGAGC TGGCCGGCGC ACGGCGCGAT CCGCGCGGCG
CGGCGGTTCG ACGTCCGCTT CGACGGCGGT TTGGACGGCG GGTTCGACCG CGGGTTCGAC
TCCCCCACCG ACACCCGACG CGGGCGCGCG CCCAGCAACC CCCGGAGCGG CCGCGAGCCG
CGGAAACGCT AG
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| Protein sequence | MCPVPAPTGG VPRQASLAEL GRPLSDLTFV VVDLETTGGS PATSEITEIG AVRVRGGQIL
GEMSSLVRPS APIPAFISVL TGITGAMVAT APGIGEVVPT FLEFARGAVL VAHNAPFDLG
FLRAAATACG YPAPAWEHLD TVRIARRVIS RDETRDCRLS SLAALFGSAT QPNHRALADA
RATVDVLHGL FERLGNLGVT TIEDLHEYSA RVSPAQRRKR HLADDLPTGP GVYVFRDGTG
RPLYVGTSRS VRSRVRTYFT ASEPRTRMAE MVAIAERVDA IECAHALEAE VRELRLIAEY
KPPYNRRSRF PERAVYLRLT DEPFPRLSRV RSVGDGVTSL GPFGSAAAAE SAATALLEAI
PLRQCSTRLS PRRPTAACAL AELGRCGAPC DGREGVAEYG QHVATARGAM TADPRPVVDV
LERRIARLSA DQRYEEAAGV RDRLAAYVRA VARMQRLTAL TCIDELVAAA PTADAGWDLA
VVRRGRLVSA ASVPRGTDPR PWVDAVVASA ETVRPLPGPT PCASVEETER IGRWLAGPGV
RLVRLDGEWS WPAHGAIRAA RRFDVRFDGG LDGGFDRGFD SPTDTRRGRA PSNPRSGREP
RKR
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