| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1764 |
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| Symbol | thrS |
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| ID | 5670166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2114770 |
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| End bp | 2116746 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641240685 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_001506108 |
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| Protein GI | 158313600 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.279145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00103927 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCCGACG TCCGCGTAAC CGTCCAGCGA GGTCAGCAGG CCGAGGAGCG GGTGGTGCGG
ACGGGGACTA CGGCCGCCGA GCTCTTCGAC GGGGAGCGGT CGGTGATCGC GGCCCGCGTG
GGTGGTCTCC AGCGTGACCT CTCCCATCCG CTCGCCGCCG GTGACGTCGT CGAGCCGATC
ACCGTCGACT CGCCGGACGG GCGGGCCATC GTCCGCCACT CCTGCGCCCA CGTGGTGGCA
CAGGCGGTGC AGGACCTGTT CCCCAAGGCC CGGCTCGGCA TCGGCCCGCC GATCCAGGAC
GGCTTCTACT ACGACTTCGA CGTCGAGCGC CCGTTCACCC CGGAGGACCT CAAGGCCGTC
GAGAAGCGCG CCCAGGAGAT CATCAAGGCC GGCCAGCGCT TCGCCCGGCG GGTCGTCTCC
GAGGACGAGG CGCGCGCCGA GCTCGCCGAC GAGCCGTACA AGATCGAGCT GATCGGGCTG
AAGTCCAGCG CGGGCGACGA CGCCGAGGCC GGGGTCGAGG TGGGCGAGGG CGAGCTCACC
ATCTACGACA ACCTCGACCC GAAGTCCGGC GAGCTGTGCT GGAAGGACCT GTGTCGCGGG
CCGCACGTGC CCACCACCCG GCACATCCCC GCGTTCGCCG TCCAGCGCTC GGCGGCGGCG
TACTGGCGGG GCAGCGAGCG CAACCCGCAG CTGCAGCGCA TCTACGGCAC CGCCTGGGAG
TCCCGCGACG CGCTCAAGGC CTACCAGCAC CGGCTGGCCG AGGCGGAGAA GCGCGACCAC
CGCCGGCTGG GCGCCGAGCT CGACCTGTTC TCCTTCCCGA CCGAGATCGG GCCCGGCCTG
GCCGTGTTCC ATCCCAAGGG CGGCGCGATC CGCACCGTGA TGGAGGACTA CTCGCGGCGC
CGGCACATCG AGGCCGGGTA CGAGTTCGTC AACACCCCGC ACATCACCAA GTCGGATCTC
TACGAGATCT CCGGGCACCT CGACTGGTTC GCCGACGGCA TGTACCCGCC CATGCAGCTC
GACGGCGGGG CGGACTACTA CCTCAAGCCG ATGAACTGCC CGATGCACAT CCTGATCTTC
CGGTCGCGCG GCCGGTCGTA CCGGGAGCTG CCGCTGCGGC TGTTCGAGTT CGGCACCGTC
TACCGGTACG AGAAGTCCGG GGTCGTGCAC GGCCTGACCC GGGTCCGCGG CCTCACCCAG
GACGACGCGC ACCTGTTCTG CGCCCGCGAG CAGCTGCCCA CCGAGCTCGA CACCGTCCTG
AAGTTCGTGC TCGGCCTGCT GCGCGACTAC GGCCTCGAGG ACTTCTACCT CGAGCTGTCG
ACCCGTCCGC CGGGCAAGGC GATCGGCAGC GACAAGGAGT GGGAGGAGGC GACCGAGCTG
CTGCGCGAGG CCGCCTCCAA GCAGGACCTC GAGCTCGTCA TGGACGAGGG CGGCGGCGCG
TTCTACGGGC CGAAGATCTC CGTGCAGGCC CGGGACGCGA TCGGGCGCAC CTGGCAGCTG
TCCACCATCC AGGTCGACTT CCAGCTCCCG CAGCGCTTCG ACATGACCTA CCAGGCGGCG
GACGGCACCC GCCAGCGCCC GTTCATGATC CACCGGGCGC TGTTCGGGAC GATCGAGCGG
TTCTTCGCGA TCCTGCTGGA GCACTACGCC GGCGCGCTGC CGCCGTGGCT GGCTCCCGTG
CAGGTGGTGG GCATCCCGAT CACCGACGAG CACGTGCCGT ATCTGACCGA CGTGGCGGCG
AAGCTGCGGC AGCGGGGCAT CCGCGTCGAG GTCGACTCCT CCGACGACCG GATGCAGAAG
AAGATCCGCA CCGCCCAGAA GCAGAAGGTG CCCTTCATGC TGCTCGCCGG TGACGAGGAC
GTCGCCAAGG GCGCGGTGTC CTTCCGCTTC CGGGACGGCA CGCAGCGCAA CGGCGTGCCG
GTGGACGAGG CCGTCGCGGA GATCCTCGAC GCCGTCGAGC GTCGTATCCA GGTCTGA
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| Protein sequence | MSDVRVTVQR GQQAEERVVR TGTTAAELFD GERSVIAARV GGLQRDLSHP LAAGDVVEPI
TVDSPDGRAI VRHSCAHVVA QAVQDLFPKA RLGIGPPIQD GFYYDFDVER PFTPEDLKAV
EKRAQEIIKA GQRFARRVVS EDEARAELAD EPYKIELIGL KSSAGDDAEA GVEVGEGELT
IYDNLDPKSG ELCWKDLCRG PHVPTTRHIP AFAVQRSAAA YWRGSERNPQ LQRIYGTAWE
SRDALKAYQH RLAEAEKRDH RRLGAELDLF SFPTEIGPGL AVFHPKGGAI RTVMEDYSRR
RHIEAGYEFV NTPHITKSDL YEISGHLDWF ADGMYPPMQL DGGADYYLKP MNCPMHILIF
RSRGRSYREL PLRLFEFGTV YRYEKSGVVH GLTRVRGLTQ DDAHLFCARE QLPTELDTVL
KFVLGLLRDY GLEDFYLELS TRPPGKAIGS DKEWEEATEL LREAASKQDL ELVMDEGGGA
FYGPKISVQA RDAIGRTWQL STIQVDFQLP QRFDMTYQAA DGTRQRPFMI HRALFGTIER
FFAILLEHYA GALPPWLAPV QVVGIPITDE HVPYLTDVAA KLRQRGIRVE VDSSDDRMQK
KIRTAQKQKV PFMLLAGDED VAKGAVSFRF RDGTQRNGVP VDEAVAEILD AVERRIQV
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