| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1762 |
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| Symbol | panB |
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| ID | 5670164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2112232 |
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| End bp | 2113173 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641240683 |
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| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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| Protein accession | YP_001506106 |
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| Protein GI | 158313598 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.486071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00301394 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTTCAT CGATCGGCAA GCCCCGCTCA TCCAGCGGCC CCGCCACGCC CGGAACGGAG
CCGGCGGCGA CGCTCTACGG CGCGCCGACC ACGCCCCGAA CCGGTGGCCA GGCGCCCGCC
ACACCGACCA CCATCCGGCC CGCCAGCCAC AGCCGGACCA CAGTCCGCGA CATCCGCGCA
GCCAAGGACC GCGGCCAGCG GTGGGCCATG CTCACCGCCT ACGACGTGAT CACCGCCGGG
ATCTTCGACG AGGCCGGCAT CCCGGTCCTC CTCGTCGGGG ACTCCGCGGC AAACACCGTC
TACGGCTACG AGACCACCGT CCCGATCACC GTGGACGAGC TGGTCCCGCT GGTCCGCGCG
GTGGTGCGCG GCGCGCCACA CGCGATGGTC GTCGCCGACC TGCCGTTCGG CTCCTACCAG
GCGAGCCCCG AGCAGGCGCT GACGACCGCG ACCCGCTTCC TCAAGGAGGG CGGGGCGCAC
GCGGTCAAGC TCGAGGGCGG CGCGCGGGTG CTGCCCCAGG TCGGGGCGCT GGTGGCCGCC
GGCATCCCGG TGATGGGCCA CCTCGGCCTG ACCCCGCAGA GCGTCCACGC CTTCGGCGGC
TACCGGGTAC AGGGCCGCGA CGGCGCCGGT GAGGTCCTGC TCGCCGACGC ACTGGGCCTG
CAGGAGGCGG GCGCGTTCGC CGTCGTGCTG GAGGTCGTCC CCGCCGACCT GGCCGCCCGG
GTGACCAAGG AGCTGCTGAT CTCCACGGTG GGGATCGGCG CCGGCGCCGA CTGCGACGCG
CAGGTCCTCG TCTGGCAGGA CATGGCCGGC CTGACCGGCG GCCAGGCGCC CCGCTTCGTC
AAGCGGTTCG CCGACCTGCG CACGGCGCTC ACCGACGCCG CGGCCGCGTT CCGTGACGAG
GTGTCGGGCG GCCTCTACCC GACTGTCGAG CACAGCTACT GA
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| Protein sequence | MTSSIGKPRS SSGPATPGTE PAATLYGAPT TPRTGGQAPA TPTTIRPASH SRTTVRDIRA
AKDRGQRWAM LTAYDVITAG IFDEAGIPVL LVGDSAANTV YGYETTVPIT VDELVPLVRA
VVRGAPHAMV VADLPFGSYQ ASPEQALTTA TRFLKEGGAH AVKLEGGARV LPQVGALVAA
GIPVMGHLGL TPQSVHAFGG YRVQGRDGAG EVLLADALGL QEAGAFAVVL EVVPADLAAR
VTKELLISTV GIGAGADCDA QVLVWQDMAG LTGGQAPRFV KRFADLRTAL TDAAAAFRDE
VSGGLYPTVE HSY
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