| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1742 |
|---|
| Symbol | |
|---|
| ID | 5670144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 2082045 |
|---|
| End bp | 2082614 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641240660 |
|---|
| Product | arginine repressor, ArgR |
|---|
| Protein accession | YP_001506086 |
|---|
| Protein GI | 158313578 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1438] Arginine repressor |
|---|
| TIGRFAM ID | [TIGR01529] arginine repressor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0017148 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCC GCTCGGCCGC GCCGCTGACG AAACACGCCC GGCAGGCCCG CCTCGCCGCG
CTGATCGCGG CGCGGTCGGT ACGGTCGCAG GCGGAGCTCG CGCGTCTGCT TGCCGAGGAA
GGTGTGCAGG TCACCCAGGC CACCCTGTCC CGCGATCTGG AGGACATCGG CGCGACGAAG
GTCCGCGGGG CCAACGGTGC GCTCGTGTAC TCGGTCGACG TGAACCTGGC GCCGGCCGAG
ACGGTGCGCA TCCCGCTGGC CCGGCTCTGC GAGGAGCTTC TCGTCTCGGC TGAGGCCAAC
GGCGACCTCG TCGTGCTGCG TACCCCGCCG GGGGCCGCGC AGCTGTTCGC CTCCGCGCTC
GATCGGGCGG CCCTGCCGGA GGTGATGGGA ACCATCGCCG GTGACGACAC CGTCCTGGTG
GTCTGCCGCG CGGGGCCCAC CGGCCCCGGT GGGCCAGCGT TCGCCGGCCG GCTGCTGTCG
CTGGCCGACG GCGTCGCACG GGTGGCGGTT CCACCCGGAA CGGGCGGGCA TCCCGGCATC
GGGGCAGGTA CCGGCGCGGG CGCCGGCTGA
|
|---|
| Protein sequence | MTIRSAAPLT KHARQARLAA LIAARSVRSQ AELARLLAEE GVQVTQATLS RDLEDIGATK
VRGANGALVY SVDVNLAPAE TVRIPLARLC EELLVSAEAN GDLVVLRTPP GAAQLFASAL
DRAALPEVMG TIAGDDTVLV VCRAGPTGPG GPAFAGRLLS LADGVARVAV PPGTGGHPGI
GAGTGAGAG
|
|---|
| |