Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1726 |
Symbol | |
ID | 5670128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2062633 |
End bp | 2064285 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 80% |
IMG OID | 641240644 |
Product | hypothetical protein |
Protein accession | YP_001506070 |
Protein GI | 158313562 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0455] ATPases involved in chromosome partitioning |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0145734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00227596 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGGTGA CGGGCCACGG GTCTGAACGT GACGCGGGCG GTGGACCGTC CTCGCGCGAT TCGGGCTCCG AGGGGTCCGA CTACCCGGGA GCGGGCCGCG ACCCGTTCGG TGCCGAACCG GAGTCGGTGA CGCCCGAGGC GGGCGGCGAG AGCGACTCCG GGGGCGACGC CCGCCCGGTC TCCCTGCTGG GCATGCGGAT GTCGCAGGAG ACCCAGCCCG GCCGGGCGAC GGTCAGCCGC CGGCAGACCC GCAGCCGCCC GCGCCCGCCG CGGCCCGAGC CTGGGCGCGG CGCACCGCCG CCGACTCCGC CGGCCGTCCG GCGGACGCCC GCTTCGCCCG CTCCGGCCGG CCCGCCCGCG GTCCCTCCGC CCGCGGCCGC CCCACCTGAC CGGCACCAGG CGCCCCCGCC CGACCGGCAG AAACCATCCG ACCGGCAGGT GCCGCCGGGC GCGCCCGCTC CCGCGCCGTC ATCCGGTCAG CAGGCCGTCC CGCCGCCTGC GCCGACGCCG GCCCAGCCGC CGCCGCTGGC GCCGTCCGCG GGCGGGTGGA CGCCCGACGT CGGGACCGCC GCCACACCGC CCGGCGAGCG GCCCCCGGCC CAGTGGGAGC GCGCGGCGTC CTTCGGATCA CTGCCCACCC TGCCGCCGTC GGTCCCGCTG CCGCCCGCTC CGCCGCCACC GCCATCCCCG GCACCACCAC CACCGCCGCC GCCGCCGAAT CCGGCCCCTC GAGCACCCGT GCCGTCGCGA GCGGTGGAAC GGGTGGCTCC GGCACCCGCC GTGCCCCGGC CGGCCGCGCC GCTGTCGGCC GCGTCCGAGA CGCCCCGGCC GTCGGCCGAA GTCGTTCCCG CTACGGACCG GCGTCCGGCG GTACGCGCCC TGCGGGTCCT GGTCGGTGGA TTCGGTGGCG GCTGCGGCCG CACGACGGTG GCGGCCGGCC TGGGCATGGC GCTCGCCGCG CGCGCCCACT CCCGCATCGC CGCCGTCGAC GCCTGCCCGG ACCAGTACGG CATGCTGACC CAGCGGGTCG GCCTGCGGCC GCGCCGGGTC GGGCTGCGCG AGCTGGCGGG GGCCCGGCCC CCCGTCGCGT CGCTGACCGA GCTGCGGCGC TACCTGGCCG CCGACGGTCC GGGCGGGCTC GAGGTGCTGC CCGGCGTGCA CGATCTCACC GCGCCCGGCC TGGCCGGCGA CGAGCTGGCC GCGGCCCTGG ACCTGCTTGC CCGGTGGTTC CCGGTGGTCA TCGCGGACGG GCCGTCGGGA TGGAGTCAGC CGGTGCCGGC GACCCTGCTC GCGCGCAGTG ATCTCGTTGT GGTCACCACC CGGGCCGGCG AGGCCGAACT GGCCGCGACG GACGACGCGC TCACCGCGCT CGGCGGGGCC GGCCGCCGCG ACCTCGCAGC CTCGGCGCTT GTGGCCGTGG TCGAGACCTA CCCCGCCCGG CTGACCCGCG CCGCCCGGCA GCGCCTGGAC GACCTGGCCG GCCGCGCCCG TCTCGTGGTG GTCGTCCCGT TCGACCCGGC GCTGACGGAC AGCCGTCCGT TCGCCTGGCG GAGCCTGCGC AAGCGCACCC GGGCCGCGTT CGACGATCTC GCCACGGCCG TCGACCCGGC GTCCGTGGCG GGTCCGGGCG GCCGTCCGCC GGGCACCGGC TGA
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Protein sequence | MQVTGHGSER DAGGGPSSRD SGSEGSDYPG AGRDPFGAEP ESVTPEAGGE SDSGGDARPV SLLGMRMSQE TQPGRATVSR RQTRSRPRPP RPEPGRGAPP PTPPAVRRTP ASPAPAGPPA VPPPAAAPPD RHQAPPPDRQ KPSDRQVPPG APAPAPSSGQ QAVPPPAPTP AQPPPLAPSA GGWTPDVGTA ATPPGERPPA QWERAASFGS LPTLPPSVPL PPAPPPPPSP APPPPPPPPN PAPRAPVPSR AVERVAPAPA VPRPAAPLSA ASETPRPSAE VVPATDRRPA VRALRVLVGG FGGGCGRTTV AAGLGMALAA RAHSRIAAVD ACPDQYGMLT QRVGLRPRRV GLRELAGARP PVASLTELRR YLAADGPGGL EVLPGVHDLT APGLAGDELA AALDLLARWF PVVIADGPSG WSQPVPATLL ARSDLVVVTT RAGEAELAAT DDALTALGGA GRRDLAASAL VAVVETYPAR LTRAARQRLD DLAGRARLVV VVPFDPALTD SRPFAWRSLR KRTRAAFDDL ATAVDPASVA GPGGRPPGTG
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