Gene Franean1_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1726 
Symbol 
ID5670128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2062633 
End bp2064285 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content80% 
IMG OID641240644 
Producthypothetical protein 
Protein accessionYP_001506070 
Protein GI158313562 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0455] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0145734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00227596 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGGTGA CGGGCCACGG GTCTGAACGT GACGCGGGCG GTGGACCGTC CTCGCGCGAT 
TCGGGCTCCG AGGGGTCCGA CTACCCGGGA GCGGGCCGCG ACCCGTTCGG TGCCGAACCG
GAGTCGGTGA CGCCCGAGGC GGGCGGCGAG AGCGACTCCG GGGGCGACGC CCGCCCGGTC
TCCCTGCTGG GCATGCGGAT GTCGCAGGAG ACCCAGCCCG GCCGGGCGAC GGTCAGCCGC
CGGCAGACCC GCAGCCGCCC GCGCCCGCCG CGGCCCGAGC CTGGGCGCGG CGCACCGCCG
CCGACTCCGC CGGCCGTCCG GCGGACGCCC GCTTCGCCCG CTCCGGCCGG CCCGCCCGCG
GTCCCTCCGC CCGCGGCCGC CCCACCTGAC CGGCACCAGG CGCCCCCGCC CGACCGGCAG
AAACCATCCG ACCGGCAGGT GCCGCCGGGC GCGCCCGCTC CCGCGCCGTC ATCCGGTCAG
CAGGCCGTCC CGCCGCCTGC GCCGACGCCG GCCCAGCCGC CGCCGCTGGC GCCGTCCGCG
GGCGGGTGGA CGCCCGACGT CGGGACCGCC GCCACACCGC CCGGCGAGCG GCCCCCGGCC
CAGTGGGAGC GCGCGGCGTC CTTCGGATCA CTGCCCACCC TGCCGCCGTC GGTCCCGCTG
CCGCCCGCTC CGCCGCCACC GCCATCCCCG GCACCACCAC CACCGCCGCC GCCGCCGAAT
CCGGCCCCTC GAGCACCCGT GCCGTCGCGA GCGGTGGAAC GGGTGGCTCC GGCACCCGCC
GTGCCCCGGC CGGCCGCGCC GCTGTCGGCC GCGTCCGAGA CGCCCCGGCC GTCGGCCGAA
GTCGTTCCCG CTACGGACCG GCGTCCGGCG GTACGCGCCC TGCGGGTCCT GGTCGGTGGA
TTCGGTGGCG GCTGCGGCCG CACGACGGTG GCGGCCGGCC TGGGCATGGC GCTCGCCGCG
CGCGCCCACT CCCGCATCGC CGCCGTCGAC GCCTGCCCGG ACCAGTACGG CATGCTGACC
CAGCGGGTCG GCCTGCGGCC GCGCCGGGTC GGGCTGCGCG AGCTGGCGGG GGCCCGGCCC
CCCGTCGCGT CGCTGACCGA GCTGCGGCGC TACCTGGCCG CCGACGGTCC GGGCGGGCTC
GAGGTGCTGC CCGGCGTGCA CGATCTCACC GCGCCCGGCC TGGCCGGCGA CGAGCTGGCC
GCGGCCCTGG ACCTGCTTGC CCGGTGGTTC CCGGTGGTCA TCGCGGACGG GCCGTCGGGA
TGGAGTCAGC CGGTGCCGGC GACCCTGCTC GCGCGCAGTG ATCTCGTTGT GGTCACCACC
CGGGCCGGCG AGGCCGAACT GGCCGCGACG GACGACGCGC TCACCGCGCT CGGCGGGGCC
GGCCGCCGCG ACCTCGCAGC CTCGGCGCTT GTGGCCGTGG TCGAGACCTA CCCCGCCCGG
CTGACCCGCG CCGCCCGGCA GCGCCTGGAC GACCTGGCCG GCCGCGCCCG TCTCGTGGTG
GTCGTCCCGT TCGACCCGGC GCTGACGGAC AGCCGTCCGT TCGCCTGGCG GAGCCTGCGC
AAGCGCACCC GGGCCGCGTT CGACGATCTC GCCACGGCCG TCGACCCGGC GTCCGTGGCG
GGTCCGGGCG GCCGTCCGCC GGGCACCGGC TGA
 
Protein sequence
MQVTGHGSER DAGGGPSSRD SGSEGSDYPG AGRDPFGAEP ESVTPEAGGE SDSGGDARPV 
SLLGMRMSQE TQPGRATVSR RQTRSRPRPP RPEPGRGAPP PTPPAVRRTP ASPAPAGPPA
VPPPAAAPPD RHQAPPPDRQ KPSDRQVPPG APAPAPSSGQ QAVPPPAPTP AQPPPLAPSA
GGWTPDVGTA ATPPGERPPA QWERAASFGS LPTLPPSVPL PPAPPPPPSP APPPPPPPPN
PAPRAPVPSR AVERVAPAPA VPRPAAPLSA ASETPRPSAE VVPATDRRPA VRALRVLVGG
FGGGCGRTTV AAGLGMALAA RAHSRIAAVD ACPDQYGMLT QRVGLRPRRV GLRELAGARP
PVASLTELRR YLAADGPGGL EVLPGVHDLT APGLAGDELA AALDLLARWF PVVIADGPSG
WSQPVPATLL ARSDLVVVTT RAGEAELAAT DDALTALGGA GRRDLAASAL VAVVETYPAR
LTRAARQRLD DLAGRARLVV VVPFDPALTD SRPFAWRSLR KRTRAAFDDL ATAVDPASVA
GPGGRPPGTG