| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1685 |
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| Symbol | |
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| ID | 5670087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2016644 |
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| End bp | 2017645 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641240603 |
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| Product | PaaX family transcriptional regulator |
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| Protein accession | YP_001506029 |
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| Protein GI | 158313521 |
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| COG category | [K] Transcription |
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| COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0710641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.260669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGCGC CCGCGCGGCT CGCAGGTCGC GACCGTGATC CGGGTCGTGG CCGGCGCCCG
ACCGTCCGCC GGCCGCAGGT CGGGGCCCAA GGAGCGAATC CGGCACCTCC AACGGTCGAC
GTCGTCGACC TGCCCAGGGT CCAGGCGGGC GCACAGCCCC AGCACCTGCT CACCACCCTG
CTCGGCGATT ACTGGGCCGG CCGCCGGGAG CACGTCCCGT CGGTGGTGCT GGTCAGCCTG
CTCGCGGATT TCGACGTCAG CACGGTCGGT GCCCGGGCGG CGCTGAGCCG GCTGTCGCGG
CGCGGGCTGC TGGAGTCGTC CCGGATCGGC CGCAACACCT ACTACGGGCT GACAGCGGAG
GCCTCGGCCG CGATCCTCGC GTCGGCGAAC CGGATCTTCA CCTTCGGCCT GCGGCACGAC
CCGTGGGACG GGCGCTGGAC GGTGGCGGCG TTCTCCATCC CCGAGGACCA GCGCGACGTG
CGGCACGCCG TGCGTGCACG GCTGCGTTGG CTGGGCTTCG CTCCGCTCTA CGACGGGATG
TGGGTCACCC CGCGGTCTGC CGGTGAGGCG GCCCGCCGGG TGTTCGCCGA GTTGGGCGTC
ATCGCGTCGA CGGTGCTGAT CACGACGTCG GAGGCGCGCC GCAGCGACCC CCGCCCGCCG
ATGGCCGCCT GGGATCTCAC CGAGCTGCAG CGCACCTACG AGGAGTTCGT CCGCACCTAC
ACCCCCCTGT TGGAACGGGT CCGGCACGGC GAGGTGTGCG GCGCGGAGGC ACTGGCCGCA
CGCACCGCGG TGATGGAGTC CTGGGGGCGC TTCCCGAGCC TCGACCCGGA CCTTCCGATC
GACCTGCTGC CCGGCCGCTG GCCGCGGCGC GAGGCCCGCA CGGTCTTCGC CGAGATCTAC
GACGGGCTGG CCGTCCCGGC TGTGGCGCGG GTCCGGGAGC TGCTGGCGGA GGTGTCGCCG
GAGCTGGCCG ACCTCGTCCG GCTGCGTACG ACGGTCTCCT GA
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| Protein sequence | MTAPARLAGR DRDPGRGRRP TVRRPQVGAQ GANPAPPTVD VVDLPRVQAG AQPQHLLTTL
LGDYWAGRRE HVPSVVLVSL LADFDVSTVG ARAALSRLSR RGLLESSRIG RNTYYGLTAE
ASAAILASAN RIFTFGLRHD PWDGRWTVAA FSIPEDQRDV RHAVRARLRW LGFAPLYDGM
WVTPRSAGEA ARRVFAELGV IASTVLITTS EARRSDPRPP MAAWDLTELQ RTYEEFVRTY
TPLLERVRHG EVCGAEALAA RTAVMESWGR FPSLDPDLPI DLLPGRWPRR EARTVFAEIY
DGLAVPAVAR VRELLAEVSP ELADLVRLRT TVS
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