Gene Franean1_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1679 
Symbol 
ID5670081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2007814 
End bp2010246 
Gene Length2433 bp 
Protein Length810 aa 
Translation table11 
GC content75% 
IMG OID641240597 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_001506023 
Protein GI158313515 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01525] heavy metal translocating P-type ATPase
[TIGR01511] copper-(or silver)-translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.238517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.622567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCAC CGGCCACCGA CCGGCGCCAG GTGGATCTGG TGATAGGCGG GATGACCTGC 
GCATCCTGCG CGGCTCGTGT CGAGCGGAAG CTGAACAAGC TGGACGGCGT CACCGCCACG
GTCAACTACG CCACGGAGAA GGCCAAGGTC AGCTTCCCGG CCGGCCTGCC GGCCGATCGG
CTGGTCGCCC AAGTGGAGGC CGCCGGCTAC ACGGCGACGA TCCCGCTGCC CGCGCCGTCC
CGACCGGCCG CGCGACCCGG CGCCCGTGAC GCGGCGAACC GCCCCGCCTC GGACCACGCC
ACCGGAGACC GGGCCGACGA CAGCACCGCC GTGGACAGCA CCGCCGCCGG CAGTACCGCC
GGCGGTAGCG CGGCTGACGA GAGTCTCCCC GCCGACGGTC GGGTGCGCGC CCTGCGCGAC
CGGCTGCGTG TGGTCGTCGG GTTGACCGTC CCGGTGGTGC TCCTGGCGAT GGTGCCGGCC
CTGCAGTTCG ACTCCTGGCA GTGGCTGTCG CTGACGCTCG CCGCGCCCGT CGTAGTGTGG
GGCGGCTGGC CGATCCACCG GGTGGCGTGG ACGAACCTGC GCCACGGCTC GACGACGATG
GACACGCTCG TCTCGATCGG CACCCTCGCC GCCTTCGGAT GGTCGCTGTA CGCGCTGTTC
GTCGGCGACG CCGGCGAGCC CGGGATGACC CACGACTTCA GTGTCACCGT CACTCGCGGT
GCCGGGGCGG ACAGCATCTA CCTGGAGGTG GCGGCCGGCG TCACCGCGTT CATCCTCACC
GGCCGGTACC TGGAGGCCAG AGCCAGGCGC AGCGCCGGCT CCGCGCTACG CGCGCTGCTC
GCCATGGGGG CGCGTGACGT CGCCGTTCTC CGCGACGGCC GGGAGGAACG AGTCGATGTC
GATCAGCTCG GCGTCGGTGA CCTCTTCGTC GTCCGTCCGG GGGAGAAAAT CGCCACGGAC
GGGGTGGTCG TAGCGGGCGC GTCAGCCGTC GACGCGTCAA TGCTCACCGG AGAGTCCGTC
CCGGTGGAGG TCCGTCCCGG CGACGACGTC ACCGGTGCCA CCCTGAACGC GGGGGGCCGG
CTCGTCGTCC GCGCCACGCG GGTCGGCGCG GACACCCAGC TCGCGAGGAT CGGACATCTC
GTCGAGGAGG CGCAGAGCGG CAAGGCGCCG GTGCAGCGGC TCGCCGACCG GATCGCGGCC
GTCTTCGTGC CGGTCGTGCT CGCGCTCTCG GCGCTCACCT TCGGCTACTG GGCGGGCCGG
GGGGACGGCC TGGCCGCCGC GTTCACCGCG GCCGTCGCGG TGCTGATCAT CGCGTGCCCG
TGCGCGCTCG GCCTCGCCAC GCCGACCGCC CTGCTGGTCG GCACGGGACG CGGCGCCCAG
CTCGGCCTGC TCATCCGCGG ACCCGAGGTG CTGGAGTCGA CCCGCCGGGT CGACACGATC
GTCCTGGACA AGACCGGCAC GGTGACGACC GGCGAGATGA CTCTCCTGGA CGTCGCCACC
GCCGCCGGCG AGGACCGGGA CGAGGTACTG CGGCTCGCGG GTGCCCTGGA GAGCGCCTCC
GAGCACCCGG TGGGCCGCGC GATCAGCCGG GCCGCCGCCG CGGCGGCGGC GGAGCGGTCG
TCCGCGGAGC TGCCCGGCGT CACCGAGTTC GCCACCAAGG AGGGCCTCGG GGTGCGCGGA
CTGGTCGCCG GCCGCGCCGT GCTGGTCGGC CGTCCGAGGC TGCTGACGGG GTGCTCGCAG
CCGCTGCCCG CGAACCTCGC GGAGATCGCC CGCACGGCCG AGGCCGCCGG CCGCACCGCC
GTCGCGGTCT CCTGGGACGG GCGCGCCCGC GGCGTGCTCA CCGTCGCCGA CGCGGTCCGG
CCGACCTCGG CCGCCGCGAT CCGCGAGCTG CGGGGACTAG GCCTGCGCCC GATTCTGCTA
ACCGGCGACA ACGCCTCCGT CGCGGCCACC GTCGCGGCGG AGGTGGGGAT CGCCCCGGAG
GACGTGGTCG CCGAAGTCCT GCCAGCGGAG AAGACCGAGG TCGTGCGCCG GCTGCAGGCC
GGCAACCGGG TGGTGGCGAT GGTCGGCGAC GGGGTGAACG ACGCCGCCGC GCTGGCCCAG
GCGGACCTCG GTCTGGTGAT GGGAACCGGC ACGGACGTCG CGATCGAGTC CGGTGACCTG
ACTCTCGTCC GGGCCGATCT GCTCGCGGCC GTGGACGCGA TCCGCCTGGC CCGGCGGACA
CTCGCCACCA TCCAGGGCAA CCTGTTCTGG GCCTTCGCCT ACAACGCCGC CGCGCTGCCG
CTGGCCGCGG CCGGCCTGCT CAACCCGATG CTCGCCGGGG CGGCGATGGC GGCCAGCTCG
CTGTTCGTCG TCGGCAACAG CCTGCGCCTG CGTGGTTTCA CCCCGCGGCC GGACCCGGCA
CCCGGCCCGG ACCCGGCACC CGGCTCAGAC TGA
 
Protein sequence
MSPPATDRRQ VDLVIGGMTC ASCAARVERK LNKLDGVTAT VNYATEKAKV SFPAGLPADR 
LVAQVEAAGY TATIPLPAPS RPAARPGARD AANRPASDHA TGDRADDSTA VDSTAAGSTA
GGSAADESLP ADGRVRALRD RLRVVVGLTV PVVLLAMVPA LQFDSWQWLS LTLAAPVVVW
GGWPIHRVAW TNLRHGSTTM DTLVSIGTLA AFGWSLYALF VGDAGEPGMT HDFSVTVTRG
AGADSIYLEV AAGVTAFILT GRYLEARARR SAGSALRALL AMGARDVAVL RDGREERVDV
DQLGVGDLFV VRPGEKIATD GVVVAGASAV DASMLTGESV PVEVRPGDDV TGATLNAGGR
LVVRATRVGA DTQLARIGHL VEEAQSGKAP VQRLADRIAA VFVPVVLALS ALTFGYWAGR
GDGLAAAFTA AVAVLIIACP CALGLATPTA LLVGTGRGAQ LGLLIRGPEV LESTRRVDTI
VLDKTGTVTT GEMTLLDVAT AAGEDRDEVL RLAGALESAS EHPVGRAISR AAAAAAAERS
SAELPGVTEF ATKEGLGVRG LVAGRAVLVG RPRLLTGCSQ PLPANLAEIA RTAEAAGRTA
VAVSWDGRAR GVLTVADAVR PTSAAAIREL RGLGLRPILL TGDNASVAAT VAAEVGIAPE
DVVAEVLPAE KTEVVRRLQA GNRVVAMVGD GVNDAAALAQ ADLGLVMGTG TDVAIESGDL
TLVRADLLAA VDAIRLARRT LATIQGNLFW AFAYNAAALP LAAAGLLNPM LAGAAMAASS
LFVVGNSLRL RGFTPRPDPA PGPDPAPGSD