| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1670 |
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| Symbol | |
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| ID | 5670072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1996485 |
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| End bp | 1997672 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641240588 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001506014 |
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| Protein GI | 158313506 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.868104 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGAACA CAACCGCGCC GCCGGAGCTC GCGAGCCGAG TCGGATCCGT CCAGACCTCT
CCGGTACGTG AGATTCTCGC GTTGACGGAA CGACCAGAAG TGATCTCCTT TGCCGGCGGC
CTGCCTGCGC CGGAGTTCTT CGACGCGGAG GGCATCCGGG CTGCCTACGA CCGAGTGCTG
AGTGAGGATC CGCGCCGGGT ATTGCAGTAC TCGTCGACCG AGGGCAGCCC GTTGCTGCGC
GAGACGATCG CCGCGCGGCT GGCTGGCCGG GGCCTACCCA CTCATTCCGA CGATCTTCTG
ATCACGACCG GCTCGCAGCA GGCGTTGACC CTCCTCATCA CCGCGCTTCT CGAACCCGGG
GACGCCGTTG TCGTGGAGGA TCCGACCTAC CTGGCTGTGC TGCAGTCGTT CGGCTACGCC
GGCGCACGGG TCTACCCGGT CACCACCGAC GAGCATGGCA TCGTTCCCGA CGCGCTCGCG
GAGGTCGCGG CCCGCGAGAA GCCAAAGATG ATCTATCTCG TCCCGAACTT CCAGAACCCG
ACTGGTCGGA CGGTCCCCGC GGAGCGCCGG TCCGCGATTG CCCGGGTCGC CGCCGAGTGC
GGATTCTGGA TCATCGAAGA CGACCCGTAC GGCGAGCTGC GGTTCGAGGG TGCCGCCGTG
CCATGGATCG CGTCGATCGA GGACGCGGCG GACCGCACCA TCCTGCTGGG AAGCTTCTCG
AAGACGATGG CACCGGGGAT GCGCCTCGGG TGGTTGCGGG CACCGGAAGT ACTACGCCGC
GCCTGCGTGA TCGCCAAGCA GGCCGCGGAC CTACACACCT CAACGATCGA CCAGGCGGCC
GCGGCCCGGT ATCTGATCGA CAGCGACCTC GACGCGCACA TCGCCAGGGT CTGCGCGGCC
TATCGGCCGA GGCGTGACGC GCTCCTGGCC GGGCTTCCCC GGGGGCTGCC GGCGGGCAGC
ACGTGGAACC GGCCGGAGGG CGGGATGTTC GTCTGGGCGC GGCTGCCCGA TGGCTATGAC
GCCACGGCGC TCCTCTCGGC TGCGGTCAGG AGACAGGTGG CTTACGTTCC CGGAGCACCG
TTCTACGCCG GGCCGGCGGA TGCCGCGACG CTGCGGTTGT CCTTCACGAC GCACAGCCCG
GCGGAGATCG CGGAGGGGGT GACCAGGTTG GCCAAAGCAC TCCGTTGA
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| Protein sequence | MRNTTAPPEL ASRVGSVQTS PVREILALTE RPEVISFAGG LPAPEFFDAE GIRAAYDRVL
SEDPRRVLQY SSTEGSPLLR ETIAARLAGR GLPTHSDDLL ITTGSQQALT LLITALLEPG
DAVVVEDPTY LAVLQSFGYA GARVYPVTTD EHGIVPDALA EVAAREKPKM IYLVPNFQNP
TGRTVPAERR SAIARVAAEC GFWIIEDDPY GELRFEGAAV PWIASIEDAA DRTILLGSFS
KTMAPGMRLG WLRAPEVLRR ACVIAKQAAD LHTSTIDQAA AARYLIDSDL DAHIARVCAA
YRPRRDALLA GLPRGLPAGS TWNRPEGGMF VWARLPDGYD ATALLSAAVR RQVAYVPGAP
FYAGPADAAT LRLSFTTHSP AEIAEGVTRL AKALR
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