Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1639 |
Symbol | |
ID | 5670041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1955759 |
End bp | 1956571 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641240557 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001505983 |
Protein GI | 158313475 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.066752 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTTTTC TCCCCATGCG CCGGTGCGTG ACGGTCGGCG CGGGCACGGT GGAGCACCGG GCGGACGAGT TGATCTCCTA CTGGCACCGG CACGACCTGC ACGAGGTCGA GTACGCCGTT TCCGGTCTCG CGGAGATCCG CACACCGACG ACCCACTATC TGATGCCGCC GTCCTACGCC GCGTGGGTGC CGGCCGGGGT GGAGCACTCG CCCCTGCTCA GGAACGTGAC CACGATCGCG GTGTTCTTCG ACCCCGCGGT CTTCGACTTC CCGTATTCGC GGGCCGCCGT CATTCCCGTG CCGCCGGTGC TGCGGGAGAT GATGCGGTAC GCGACCCGAT GGCCGATCGG CCGGGGCGAG GACGACGCCG AGGCCGACAC TTTCTTCAGG GCGCTGGCCG CGGTGGTCCG CGGCCAGCTC GCGCACGAGG CACCACTGTC GCTGCCCACC GCGGACGATC CCGTCGTCCG GGACGTGATG GCCTACACCA CGGACCACCT CGCCGAGGTC ACAGCGGCCC GGGTGTGCCG GGCCGTCGGC ATCTCGGAGC GGGTGCTGCG CCGGCGGTTC GCGGCCGTCC TGGGGCAGTC GTGGCGGGAG TACCTGCGGC AGGTCCGGCT GATCCGGGCC ATGGCACTGC TGAGCACGCC GACGACCTCG GTCGGCGAGA TCGCCACCGA GGTGGGCTTC GGCAGCGCGA GCGCGCTCGC ACGTGCCTTC CGGGCGTGGA CGGGAGAGAG CCCGTCCGCC TACCGCGACC GCTGGCTCAC GACCGCCGCC CTGGACGACC CCAGCCATCT GACGAGTACG TAA
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Protein sequence | MPFLPMRRCV TVGAGTVEHR ADELISYWHR HDLHEVEYAV SGLAEIRTPT THYLMPPSYA AWVPAGVEHS PLLRNVTTIA VFFDPAVFDF PYSRAAVIPV PPVLREMMRY ATRWPIGRGE DDAEADTFFR ALAAVVRGQL AHEAPLSLPT ADDPVVRDVM AYTTDHLAEV TAARVCRAVG ISERVLRRRF AAVLGQSWRE YLRQVRLIRA MALLSTPTTS VGEIATEVGF GSASALARAF RAWTGESPSA YRDRWLTTAA LDDPSHLTST
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