Gene Franean1_1639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1639 
Symbol 
ID5670041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1955759 
End bp1956571 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content71% 
IMG OID641240557 
ProductAraC family transcriptional regulator 
Protein accessionYP_001505983 
Protein GI158313475 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.066752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTTTTC TCCCCATGCG CCGGTGCGTG ACGGTCGGCG CGGGCACGGT GGAGCACCGG 
GCGGACGAGT TGATCTCCTA CTGGCACCGG CACGACCTGC ACGAGGTCGA GTACGCCGTT
TCCGGTCTCG CGGAGATCCG CACACCGACG ACCCACTATC TGATGCCGCC GTCCTACGCC
GCGTGGGTGC CGGCCGGGGT GGAGCACTCG CCCCTGCTCA GGAACGTGAC CACGATCGCG
GTGTTCTTCG ACCCCGCGGT CTTCGACTTC CCGTATTCGC GGGCCGCCGT CATTCCCGTG
CCGCCGGTGC TGCGGGAGAT GATGCGGTAC GCGACCCGAT GGCCGATCGG CCGGGGCGAG
GACGACGCCG AGGCCGACAC TTTCTTCAGG GCGCTGGCCG CGGTGGTCCG CGGCCAGCTC
GCGCACGAGG CACCACTGTC GCTGCCCACC GCGGACGATC CCGTCGTCCG GGACGTGATG
GCCTACACCA CGGACCACCT CGCCGAGGTC ACAGCGGCCC GGGTGTGCCG GGCCGTCGGC
ATCTCGGAGC GGGTGCTGCG CCGGCGGTTC GCGGCCGTCC TGGGGCAGTC GTGGCGGGAG
TACCTGCGGC AGGTCCGGCT GATCCGGGCC ATGGCACTGC TGAGCACGCC GACGACCTCG
GTCGGCGAGA TCGCCACCGA GGTGGGCTTC GGCAGCGCGA GCGCGCTCGC ACGTGCCTTC
CGGGCGTGGA CGGGAGAGAG CCCGTCCGCC TACCGCGACC GCTGGCTCAC GACCGCCGCC
CTGGACGACC CCAGCCATCT GACGAGTACG TAA
 
Protein sequence
MPFLPMRRCV TVGAGTVEHR ADELISYWHR HDLHEVEYAV SGLAEIRTPT THYLMPPSYA 
AWVPAGVEHS PLLRNVTTIA VFFDPAVFDF PYSRAAVIPV PPVLREMMRY ATRWPIGRGE
DDAEADTFFR ALAAVVRGQL AHEAPLSLPT ADDPVVRDVM AYTTDHLAEV TAARVCRAVG
ISERVLRRRF AAVLGQSWRE YLRQVRLIRA MALLSTPTTS VGEIATEVGF GSASALARAF
RAWTGESPSA YRDRWLTTAA LDDPSHLTST