Gene Franean1_1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1605 
Symbol 
ID5670008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1921280 
End bp1922284 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content70% 
IMG OID641240524 
Productalpha/beta hydrolase fold 
Protein accessionYP_001505950 
Protein GI158313442 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.695033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACGGA GAGTCCAGAA CCGTGCGCGC AGAGACCAGC ACGGCCGACC CGATCCGCCT 
AGCGTGGACG TGAGGGGACG CCTGCTGACG GCCGGCGCCA GGGATGTTCC TACGCCCCCG
GGGCCGCCGA GAGGAGACAT CGTGGCGACC GTGACGACGC TGGACGGCAC CGAGATCTAC
TACAAGGACT GGGGCGAGGG CCGGCCCGTG GTTCTCAGCC ACGGCTGGCC GCTGCAGGCG
GACAGCTGGG AGGCCCAGAT GCTCTTCCTG GCCTCGAACG GCTACCGCGT CGTCGCGCAT
GACCGCCGCG GCCACGGGCG GTCGTCCCAG CCGTGGAACG GCAACGACAT GAACACCTAC
GCCGACGATC TCGCCGCGCT GATCAGTCAT CTGGACCTGC GTGAGGTCAC GCTGGTCGGG
TTCTCGACGG GCGGCGGCGA GGTGGCCCGG TACGTCGGTC GGCACGGCAC GGACCGTGTC
GCGCAGATCG TGCTGGTCTC CTCCGTGCCG CCGTTCATGC TGAAGACCGA CGACAACCCT
GGCGGCGTTC CGGCCGAGGT TTTCGACGGC CTCCGTGCCG CCTCGCTCGC CGACCGTTCA
CAGGCCTACC GGGATCTCGC CGACGGCCCG TTCTTCGGCG CGAACCGTCC CGGGCAGGAA
CGCTCCCAGG GCATCCGCGA CTCGTTCTGG CTGCAGGGAA TGCAGACCGG AGCGCGCAAC
GCGTTCGAGT GTATCGCCGC GTTCTCGGCC ACCGACTTCC GGCCTGATCT CGCCGCGTTC
GACGTGCCGA CGCTCGTCAT CCACGGGGAC GACGACCAGG TGGTCCCGAT CGAGGTCGGC
GGCAGGCGTT CGGCGGAACT GGTCAAGGGC GCCGAGCTGA CGGTGTACGA AGGTGCTCCG
CACGGCATCA CCGAGACGCA CAAGGACCGG CTGAACGCCG ACCTGCTGGC TTTTCTCGCC
ACTCACCCCA CCTCCGCCCC CACCTCCGCC CCCGCCTCCG CCTGA
 
Protein sequence
MARRVQNRAR RDQHGRPDPP SVDVRGRLLT AGARDVPTPP GPPRGDIVAT VTTLDGTEIY 
YKDWGEGRPV VLSHGWPLQA DSWEAQMLFL ASNGYRVVAH DRRGHGRSSQ PWNGNDMNTY
ADDLAALISH LDLREVTLVG FSTGGGEVAR YVGRHGTDRV AQIVLVSSVP PFMLKTDDNP
GGVPAEVFDG LRAASLADRS QAYRDLADGP FFGANRPGQE RSQGIRDSFW LQGMQTGARN
AFECIAAFSA TDFRPDLAAF DVPTLVIHGD DDQVVPIEVG GRRSAELVKG AELTVYEGAP
HGITETHKDR LNADLLAFLA THPTSAPTSA PASA