Gene Franean1_1391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1391 
Symbol 
ID5669799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1684631 
End bp1685146 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content68% 
IMG OID641240317 
Producthypothetical protein 
Protein accessionYP_001505744 
Protein GI158313236 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.268781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATCGG CACCGGTCCA TCACGACCAC GGGCTCGGCG GGGTCCACAT CAAGTACCTG 
CTGCACTGCC CCCGTCAATT GTGGCTCTAC ATGCGTGGCT ACCGCCCCGA GGCCACGAGC
GACCTCGTCG CTTTCGGCGA GATCGTCGAC GACACCACCT ACACCCGTCG CCGCGACGTC
GACCTCGGCC AAGCGAAGAT CGACTGGGTG ACCACGGGAG CGGTCATCCA CGAGACCAAG
TCGTCCCGGA CGCCGTCGCC GGCACACGAG GCTCAGGTCC GCCACTACTG CCTGCTGTTG
GAACGCCGTG GCGTTCACGT CCGCGGCGGC ACCATCCACT ACCCACTGAT CCGGCGCACC
GTCCCCGTCA CCTGGGACGA CGCCGCCCGC GGCCAAGCAC TCGACACCGA GAAACAGGCC
GCCGCCGTGA TCTCCGCACC AGCCGCACCG CCACGGCTGG AACGCCGGCG CTGCCGCGGC
TGCTCCTATC TCGACTACTG CTGGGGACAG ACATGA
 
Protein sequence
MKSAPVHHDH GLGGVHIKYL LHCPRQLWLY MRGYRPEATS DLVAFGEIVD DTTYTRRRDV 
DLGQAKIDWV TTGAVIHETK SSRTPSPAHE AQVRHYCLLL ERRGVHVRGG TIHYPLIRRT
VPVTWDDAAR GQALDTEKQA AAVISAPAAP PRLERRRCRG CSYLDYCWGQ T