| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1279 |
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| Symbol | |
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| ID | 5669692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1541703 |
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| End bp | 1542635 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641240211 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001505639 |
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| Protein GI | 158313131 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.574858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGCTCC ATCAGCTTGC GTATTTCGTG GCCGTGGCCG AGACCAGGCA CTTCACCCGT
GCGGCCGAGC GTGAGCACGT AGCGCAGCCG TCCCTCTCGC AACAGATCCG TGCCCTGGAA
CAGGAGCTGG GTAGTCCCCT GTTCAACCGA ATGCGGGGGA ACATCACACT CACTCCGGCA
GGGGAGACAC TGCTCCCGCT GGCACGAAGG ATCCTCGCCG ACACCGAGAC GGCCCGCCGT
CAGGTGCAGG AGCTGCTCGA CCTGCGGCAC GGCACCGTGC GGCTGGGCGC GACGCCGAGC
CTGTGCACCG GGTTCCTGCC CGAGGTGCTG CACGCCTTCC ACCTCGACTA CCCGGGCATC
CGGCTGCTCG TCGAGGAGGG CGGCTCGCGC GATCTCATCC GCGACCTGGC GCAGGGCCAC
CTCGACCTGG CGCTCATCAT CCTTCCGCTG CACAGCTCGG ACCCGGCGCT GTCGACCACG
CCGCTGCTGC GCGAGGACCT GGTCGTCGTC ACGTCCGAGA ACTCCCCGCC GCCGGCGCGG
GACGGCCACC TCCAGGTGTC CGACCTGCGC CACCGCCCGC TGGTGATGTT CCGCCGGGGC
TACGACCTCC GGGAGTTCAC CGTGAGCGCC TGCCGGGTCG CCGGCTTCGA GCCGACCTTC
GCGATCGAGG GCGGGGAGAT GGACGCGGTG GTCGGCTTCG TCGAGGCCGG ACTGGGTGCC
GCGGTGATCC CGAGCATGGT CGCCCGGCGT CAGCGGCTGC GTACCACCGC CTTCGCTCCG
CCCGGTCTGC ACCGGACGAT CGGGCTGGCC CACCGCCGTG ACGTCGAGCC GCCGCGGGCG
GCCCAGGAGC TGCGGCGCAG CCTGCGGGCC TACCTGAAGA GCACGGCTGA GGCCGGAACG
CTCCCGCCGG GCACGGATCT CCTGCCCGGG TGA
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| Protein sequence | MQLHQLAYFV AVAETRHFTR AAEREHVAQP SLSQQIRALE QELGSPLFNR MRGNITLTPA
GETLLPLARR ILADTETARR QVQELLDLRH GTVRLGATPS LCTGFLPEVL HAFHLDYPGI
RLLVEEGGSR DLIRDLAQGH LDLALIILPL HSSDPALSTT PLLREDLVVV TSENSPPPAR
DGHLQVSDLR HRPLVMFRRG YDLREFTVSA CRVAGFEPTF AIEGGEMDAV VGFVEAGLGA
AVIPSMVARR QRLRTTAFAP PGLHRTIGLA HRRDVEPPRA AQELRRSLRA YLKSTAEAGT
LPPGTDLLPG
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