Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1268 |
Symbol | |
ID | 5669681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 1526172 |
End bp | 1526927 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641240200 |
Product | protein tyrosine/serine phosphatase |
Protein accession | YP_001505628 |
Protein GI | 158313120 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.322481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.321151 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACCGCT GGTTCGACCT CGCAGGCACT GACAACACCC GTGACCTCGG CGGGATGCCG ACGCCCGACG GGCGCCTGAC CCGGTCGGGC GTCTTCCTGC GCAGCGACAC CCTGCAGGAG CTGACCACCG CCGACGTGGC CCGGCTGCGC GAGGTGTTCG GCCTGCGGAC GGTGCTCGAC CTGCGGGCCC GGGTGGAGGC CGCGCGGGAG GGCCGCGGCC CGCTGGAGTA CGAGGACGTG GCCTACCACA ACCACTCGTT CCTGCCCGGC GAATGGATCA TGCCGGACGA TCCCCGGTTC CCCGCGATCG TGAAGGACCT CGACTCGGTC GACCGGGTCG AGCACTACCT GGACTACCTC CGCCTGGCCG GGGACGCCGT GGCCGAATCC ATCCGCCTGC TCGCCCAGCC GGTGACGGGG CCGACGCTGT TCCACTGTGC CGCCGGCAAG GACCGCACCG GCGTGCTGTC GGCGCTCCTG CTCGGGATCG TCGGCGTCGA CGACGAGGCG ATCATCAAGG ACTACACCCT GACCAACGAG CGCATCGCCC GGGTCGACGC CCGGCTCGCC CGCCGCCCGT CCTACAACCG GCCCGAGGAT CCACTGACCA TCGACAAGAT GAGCTGCCGG CCGGAGGTCA TGCGCGGTTT TCTCGGCGGT GTCGCCGAGA TCTGGGGTGG TCCGGCCGCC TGGGCGCGCG GGGCGGGCGT CCCCGAGGAG GACCTGCGCT CGCTGCGGTC ACGGCTTGTC GGGTGA
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Protein sequence | MHRWFDLAGT DNTRDLGGMP TPDGRLTRSG VFLRSDTLQE LTTADVARLR EVFGLRTVLD LRARVEAARE GRGPLEYEDV AYHNHSFLPG EWIMPDDPRF PAIVKDLDSV DRVEHYLDYL RLAGDAVAES IRLLAQPVTG PTLFHCAAGK DRTGVLSALL LGIVGVDDEA IIKDYTLTNE RIARVDARLA RRPSYNRPED PLTIDKMSCR PEVMRGFLGG VAEIWGGPAA WARGAGVPEE DLRSLRSRLV G
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