| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1254 |
|---|
| Symbol | |
|---|
| ID | 5669667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 1511348 |
|---|
| End bp | 1512007 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 641240186 |
|---|
| Product | molybdopterin-guanine dinucleotide biosynthesis protein |
|---|
| Protein accession | YP_001505614 |
|---|
| Protein GI | 158313106 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0746] Molybdopterin-guanine dinucleotide biosynthesis protein A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000236078 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.031709 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACACCAC TCTCGCCGTC GCCGTCGCCG TCGGGGGAGC TGGGCGATCC GTGGGACGCG
CTGGTCCTCG CCGGCGGCCA CTCCCGGCGG CTCGGCGGCC AGGACAAGGC CAGCGCTGTT
GTCGGTGGCC TGCGACTGCT GGACAGGGTG CTCGCCGCCG TCGGCGCGGC CGAGCGGATC
GTCATCGTCG GGCCGCCGCG CCCGGCCCGG CCCGGTTCCC GGTCGGTCCG CTGGACCCGC
GAGGACCCGC CGGGCGGCGG GCCGGTCGCC GCCATCGCCG CCGGGCTGCG GCTCGTCGAG
GCCCCGCTGG TAGCGGTACT CGCGGTCGAC CTGCCCTTCA TCGGCGCCGC GGAGCTCGCC
GACCTTCTCG GATCGCTGCG CGGCGAGCCA CCGGGTCACC GTGACGCCGA CGTGGCGGTG
CTGGCCGATC CGGCGGGCCG GCCGCAGTAC CTTGCGGCGG CCTGGCGCAC CGCCGCGCTG
CGCGCCGCCC TGCCGGCAGA CCCGGCGGGC CGCTCGGTGC GCTCGCTGCT GGCCGGGCGG
GATGTGCGGA CTGTCACCGC CACCGCCGAC GCCTGCCTTG ACTGCGACGA CCCGGCGTCG
CTGGTGGCGG CCCGGGCCCG GGCGGTCCCC GGACCGCACG GCTCGGGCAC GATGCCCTGA
|
|---|
| Protein sequence | MTPLSPSPSP SGELGDPWDA LVLAGGHSRR LGGQDKASAV VGGLRLLDRV LAAVGAAERI
VIVGPPRPAR PGSRSVRWTR EDPPGGGPVA AIAAGLRLVE APLVAVLAVD LPFIGAAELA
DLLGSLRGEP PGHRDADVAV LADPAGRPQY LAAAWRTAAL RAALPADPAG RSVRSLLAGR
DVRTVTATAD ACLDCDDPAS LVAARARAVP GPHGSGTMP
|
|---|
| |