| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1251 |
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| Symbol | |
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| ID | 5669664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1506549 |
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| End bp | 1508816 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 641240183 |
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| Product | putative DNA-binding protein |
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| Protein accession | YP_001505611 |
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| Protein GI | 158313103 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00288406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0497189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGAGC TGCGGGCGGT CGCACTCAGC GAGGACGGCG GTTATCTCGT GCTCGCCGAC
GCCGCCGGGC GCGCGGACGC GGAACAGTTC CGCGTCGCGG TGGACGATCG GCTGCGCGCG
GCGCTGCGCG GAGCCCGACG TAGTGAAGTA CGCGCGGAAA GCGCGCTGAC CCCCCGTGAG
ATCCAGGCCC GACTTCGGGC CGGTGAGACC GCCGCCGACG TCGCGCGGGC CGCGGGCATC
CCGGTGGAGC GGGTCGAGCG CTACGAGGGG CCGGTGCTGG CCGAACGCGC CCGGGTGGTC
CAGGAGGCGC GCGCCGCGCT GCTGCCCAAG GATCCGGGCG GGGTGCCCGG CCGTCCCCTC
GGCGAGGTGG TCGACGCACG GCTGCTCAGC GTGCAGGACG ACCCGGACAC CGCCCAGTGG
GACGCCTGGC GCCGGGTGGA CGGGATCTGG CTGGTCCAGC TCACCTCGGA CAGCAGGTGC
GCCCGGTGGA CGTGGGACCC GGTGGTGCGC CGGGTGCGCC CGCACGACGA CGCGGCCCGG
GCGCTGGTCG CCCCCGAATC AGCGGAGCCG CCCGCCCCGC AGCCGGCGCA GCCGCCCGTG
CGCGCCGCCG GCCCGGCGCT GACCCTGGTG CACGACCAGG GCGCGGCGGC GGCCTACCCG
ACGCAGTCCG CGGCCGGTGG ACCCGGCCAG CAGCTTCCGG GAACGCAGCC CTCGACGGCT
CCCCCCTCGG CCTTCCCCGC TCCGGCGGCC GTCAACGGGA CGGGCTACCT CCCCAGCGCG
GCTGCGCCGG GGTACGGGCC GTCGCCGGCC CAGGGGCCCG CGGGCGAGTC TCCGGACCGC
CGCCCGGCCG AGCGGGCCGG CGACGACTAC GCCACGGACC ACACCACTCC TGACCACGGG
GCGCCCGACT ACGCGACCCC CGGCTACGAG AACACCAGTT ACGAAGCCTC CGGCTATGGA
GGCTCCGCCC AGGAAGCCGC CGGCCAGGAC GCCGCGACGC GGGCGAACAC GGGGCAGGGA
GCCGGCGGCC ACGGCACCTC GCCGGACCAG GCTGGTCCGG ACGAGTACCA GGGCCCGGTG
GCCGCCCCCG CCGCGAGCCG TACGGCCGGC GCCGCGCGGC GCAGCATGCC CGGTGCGTGG
CCGGCGGCCC AGGGCGGGGC CCCAGGCCTG TCCGGGCGGC ACAGCGGCGC GGGAGGCCGG
CGCACCACGC CCCCGAGCCG GTTCGGCTCC CGGGAGCGGG CCGTTCCGCC GCCGACACCG
GCGGCCGAGC CGAGGTGGCT GCCGAACCCG GATACCGAGT ACTCCGAGGT GACCGCCACC
GCCGTCGACG CGGCGGCGGC CAACGAGGCG GAGTTCGGCC ACGCCGGCGC GGCTGACATG
GAGTCCACCA AGACAGACCT GGTCGCGGTG GCCGAGGCGG CCCTCGCCCC GGCGCCGGAA
TCGGCCGAGC CCGGCATCCC GAGCGAGGAC GCCCAGGACA CCCCGGGCGG CTCGGCCGAC
CCGGACGAGA CCGTTCAGGC CGCGCACGCC GCCGGTCTGG ACGAGGACGA CGAAGACGAC
GATGAGGACA CCGAGGACGG CGGCGACCGG TCGGTGAGCG AGGCGGCGCC CGGCGGGGCC
GGGCGGCCCG CGGCTCCCGC GCCGACAGGG CAGCCGGTGC TCCGACCGGC CGCGATCGTG
CCGCCTGCGG CCGCGGAGCC GGCGCGGGAA CCCACGACGC CGGTGGAGCG GGTGCCGCGC
CGTCCGGCGG CCGCCGCCGC CCGCCGGCCA GCTGTCGCCC GCACCGCTGG CGGTGCCCGT
TCACTCGGGG CGCTCGCGGC AGCCGCTGAG GACCTGGACG GCGGCACTGC GGCCTCGGCG
GCTCCGGCTG GTGGCGGCCG AGGCGCCGCT GCCCCGGGGC GCGGCGGAGC ACCGCGCCGG
CCGGCAGCGG GCCGGGCCGT GGACGGCCCG GCGGGTCGCC CCGCGCGCCC CGGCTCCACC
GCGGCGGAGC ACCCCGCCGA GCCGTCCACC GCGGCCGACA GCGAGTTCGA GACCACGGCG
GAGACCACCA CTGCCGCCAC GGTCGGCGAC ACCGCCTCCG AAGCCGCCAC AGAGGCCGCC
ACAGAGGCGG CCCAGCAGGC CGCACGGGCC GCCCAGCCGG CCGCCGCGGG CAACCGCGGA
CGGCAGCCGG CGGCAGGTCG TAGCGGCGAA CGTCCCGCAG GCGGTCGACG CGGACGCAAG
TCGGTGCCAG CATGGGACGA CATCGTGTTC GGCGCCCGCC GGCCCTAG
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| Protein sequence | MRELRAVALS EDGGYLVLAD AAGRADAEQF RVAVDDRLRA ALRGARRSEV RAESALTPRE
IQARLRAGET AADVARAAGI PVERVERYEG PVLAERARVV QEARAALLPK DPGGVPGRPL
GEVVDARLLS VQDDPDTAQW DAWRRVDGIW LVQLTSDSRC ARWTWDPVVR RVRPHDDAAR
ALVAPESAEP PAPQPAQPPV RAAGPALTLV HDQGAAAAYP TQSAAGGPGQ QLPGTQPSTA
PPSAFPAPAA VNGTGYLPSA AAPGYGPSPA QGPAGESPDR RPAERAGDDY ATDHTTPDHG
APDYATPGYE NTSYEASGYG GSAQEAAGQD AATRANTGQG AGGHGTSPDQ AGPDEYQGPV
AAPAASRTAG AARRSMPGAW PAAQGGAPGL SGRHSGAGGR RTTPPSRFGS RERAVPPPTP
AAEPRWLPNP DTEYSEVTAT AVDAAAANEA EFGHAGAADM ESTKTDLVAV AEAALAPAPE
SAEPGIPSED AQDTPGGSAD PDETVQAAHA AGLDEDDEDD DEDTEDGGDR SVSEAAPGGA
GRPAAPAPTG QPVLRPAAIV PPAAAEPARE PTTPVERVPR RPAAAAARRP AVARTAGGAR
SLGALAAAAE DLDGGTAASA APAGGGRGAA APGRGGAPRR PAAGRAVDGP AGRPARPGST
AAEHPAEPST AADSEFETTA ETTTAATVGD TASEAATEAA TEAAQQAARA AQPAAAGNRG
RQPAAGRSGE RPAGGRRGRK SVPAWDDIVF GARRP
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