| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1217 |
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| Symbol | |
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| ID | 5669630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1452700 |
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| End bp | 1457541 |
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| Gene Length | 4842 bp |
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| Protein Length | 1613 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641240149 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001505577 |
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| Protein GI | 158313069 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0938904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGTGG TAGGACGCAG ACTGGTGCAC GTGACCGCAT CGGACCCACT CGCCGCCTTC
TCGGCACCGA CCAGGGAATG GTTCGCGTCC TCCTTCGCGG CGCCGACTCC GGCCCAGGCC
GGCGCGTGGG CAGCCGTCGC CGGTGGGGAA AGCGCCCTGG TCGTCGCTCC GACCGGGTCG
GGCAAGACAC TCGCCGCCTT CCTCTGGTCG CTGGACTCGT TGGCCCGCTC GGCGCCGCCG
GCCGATCCGG CCCGCCGCTG CCGGGTGCTC TACGTCAGCC CACTCAAGGC GCTGGCGGTC
GACGTGGAGC GCAACCTGCG CGCGCCGCTC ACCGGCATCC GGGCCGCCGC CACCCGGCTC
GGCCTGCCCG TGCCGGACGT GTCCGTGGGT GTCCGCTCCG GTGACACCCC GGCGGCCGAG
CGCCGGGCGT TCGGCCGCAC CCCACCGGAC ATTTTAATCA CCACGCCGGA GTCGCTGTTC
CTGATCCTCA CCAGCGCCAC GCGGGAGGCG CTGCGCGGCG TGGAGACGGT GATCGTGGAC
GAGGTGCACG CGGTGGCGGG CACCAAGCGC GGCGCCCACC TCGCGCTCAG CCTCGAGCGC
CTCGACGACC TGTTGGACGT CCCCGCCCAG CGGGTCGGCC TGTCCGCGAC GGTGCGCCCG
GTCGACGAGG TGGCCCGGTT CCTCGGCGGG CCGCGGCCGG TCACCGTGGT GCGCCCGCCG
GCGGCGAAGA CCCTCCATAT AGACGTCGTG GTCCCGGTCG AGGACATGGC GAACCTCGGC
GAGGTGGCCG GCGCGGTCCC GGAGGGCTCC GCCGCCGGGG CGGCGCCGCG GGCGTCGATC
TGGCCCGCGG TCGAGGAGAA GGTGCTCGAC CTGATCCTCG GCCACTCCTC GACGATCGTG
TTCGCGAACT CCCGACGGCT GGCGGAGCGG CTGTGCGCGC GGCTGAACGA GTTGTACGCC
GACCGTCTCG CCACGGCGGA CGCCACGGGC GACCCCGATG GTCAGGAGAC CGGCGGCTGG
GAGTCCGGCG GGTGGGAGAG CGGCGAGCGC GCCGGCCCCG CGGGCTCCCG CGCCCCCGCG
GAGATCATGG GGGCCGCCGG TTCGGCCGTG TCGCCGGCCG AGGTCGAGGT GGCGCGGGCG
CACCACGGCA GCGTCAGCCG TGAGCAGCGC ATGCTGATCG AGGAGGACCT CAAGGCCGGG
CGGCTGCCCG CGGTGGTCGC CACGTCCAGC CTCGAGCTGG GTATCGACAT GGGCGCGGTC
GATCTGGTCG TGCAGATCGA GTCGCCGCCC AGCGTGGCGG CCGGCATGCA GCGGATCGGC
CGGGCCGGCC ACCAGGTCGG CGCGGCCAGC CGGGGGGTGG TGCTGCCCAA GCACCGCTCC
GACCTGCTGG AGTGCGCGGT CGTGGCCGAG CGGATGAGCG ACGGGCGCAT CGAGGCCGTG
CGCTACCCGC GCAACCCGCT CGACGTGCTG GCCCAGCAGA TCGTCGCGAT GGTGGCGGTC
GAGGACCGCG AGGTGGACGA GCTGGGCGCG CTGGTCCGCC GCGCGGCGCC GTTCGCCACC
CTGCCCGCCT CCGCCTACGA GGCCGTGCTG GACATGCTGG CCGGGCGCTA TCCGTCCGAC
GACTTCGCCG AGCTGCGCCC GCGCATCACC TGGGACCGGG CGACCGGGGT CCTCGCGGGC
CGGCCGGGCG CCCAGCGGCT CGCCGTGACC AGCGGCGGGA CGATCCCCGA CCGCGGCATG
TTCGGGGTCT TCCTCGTCGG TGAGAAGGCC AGCCGCGTCG GCGAGCTCGA CGAGGAGATG
GTCTACGAGT CCCGGGTCGG CGACGTCGTC CTGCTCGGCT CGTCGAGCTG GCGGATCGAG
GAGATCACCC CGGACCGGGT GCTGGTGACC CCGGCGCCGG GCAGGCCCGG CCGGCTGCCG
TTCTGGCACG GTGACGCACC GGGCCGGCCT GCCGAGCTCG GCCGCGCGCT CGGCGCGTTC
CTGCGGGAGC TGTCCGCGGC GAGCCCGCGG GACGCCGCCG ACCGGGTGCG GGCCGCCGGG
CTGGACACCT GGGCGACCGC GAACCTGCTG ACCTACCTGG ACGAACAGCG CGCCGCCGCC
GGGCATCTCT CCGACGACCG TCGCATCGTC GTGGAGCGGT TCCGCGACGA GCTGGGCGAC
TGGCGCCTGG CCGTCCACTC GCCGTTCGGC GCGCCGGTGA ACGCGCCCTG GGCGCTGGCG
ATCGGCGCCC GGCTGCGGGA GCGCTACGGC GCGGAGGTCC AGATCATGCA CACCGACGAC
GGCATCGTCG CCCGCGTGCC CGACGCCGCC GAGCCCCCCG AGGCCGAGCT GGTCGTCTTC
GAGCCCGAAG AGACCGAGGC GCTCGTCCGT GCCGAGGTGG GCGGCAGCGC CCTGTTCGCG
AGCCGGTTCC GTGAGTGCGC GAGCCGCTCG CTGCTGCTGC CCCGCCGTAC TCCCGGGCGG
CGCACGCCGC TGTGGCAGCA GCGCCAGCGC AGCGCGCACC TGCTGTCGGT CGCCTCGACC
TTCGGTGACT TCCCGGTCGT GCTCGAGACG ATGCGCGAAT GCCTGCAGGA CGTCTACGAC
GTCCCGGCCC TGGTGGGCCT GATGCGCGAC ATCGGCGCCC GCTCGCTGCG GGTGGTCGAG
GTCGAGACGC CGTCCCCGTC CCCGTTCGCC TCGTCGCTGC TGTTCGGCTA TGTCGCCGCG
TTCATGTACG ACGGCGACGC GCCGCTGGCC GAACGGCGCG CCCAGGTCCT CTCCCTGGAC
AGCTCGCTCC TCGCCGAGCT GCTCGGTGAG GCCGAGCTGC GCGAGCTCAT CGATCCCGGG
GCGCTGGAGC GGATCACCGC CGAGCTCCAG CGGCTGGTAC CCGACCGGCA CGCCCACGGC
GTCGAGTCCA CCGCCGACCT GCTGCGCGCC CTCGGTGACC TGACGGACGA GGAGGCCGGG
GCGCGGGGGG TGGCGCCGTC CTGGCTGGCG GCGCTGGCGG ACGCCGGGCG GGTGATCCGG
GTGCGGATCG GCGGCGAGGC GCGCTGGGCG CCGGTCGAGG ACGCCGGCCG CCTGCGCGAC
GCGCTCGGTG TTCCGCTGCC GATGGGAGTG CCGGCGGCGT TCACCGAGCC GGTCCGCGAT
CCGCTCGGCG ACCTGGTCTC CCGCTACGCC CGCACCCACG GCCCGTTCGA GCCGGCCGCC
GTCGCCGCCC GTTTCGGGCT CGGGGTGGCG GTGGTCGTCG GGGCCCTCGA GCGGCTCACC
GCGGCCGGGC GGCTGGTACG CGGCGAACTC CACCCCGACC GCGCGGGCGA GCAGTGGTGC
GACGCGGGGG TGCTGCGCGC GCTGCGCCGC CGCAGCCTGG CTGCGCTACG CAAGGAGGTG
GAGGCCGTCC CCACCCGGGC GATGGGCGCG TTCCTGCCCG CCTGGCAGTC GGTGACGACA
GGCCGCGGGC ACGGTGTGGA CGCAGTGCTG CGCGCCGTGG AGCAGCTCCA GGGCGCACCG
GTGCCGGCGA GCGCGCTGGA GCAGCTCGTC CTGCCCGCCC GGGTCAGCGA CTACTCATCG
GCGATGCTGG ACGAGCTGTG CGCGACCGGC GAGGTGCTGT GGGCCGGGGC CGGCGGCCTG
CCCGGCAACG ACGGTTGGGT CACCCTCGTG CTGGCCGACT CCGCCGGGGA GCTGCTGCCC
CCACCCGACC TGGACGCCGC CGGCGGCGAC CTGCACCGCG CGATCCTCGA CGCCCTCGCC
GGCGACCAGG CGCTGTTCTT CCGGACCCTC TCCGACCGGG TCGGCGCGCT CGACGACACG
GCCCTGGCGG ACGCGCTGTG GGATCTGGTG TGGGCCGGTC TGGTCACCAA CGACACCCTT
GCCGCCCTGC GCGTCCAGCT CGGCGCCGGG CGTCCGGCGC ATCCCGCGCA TCCGGTGCCG
CCGCGCCGGC GCTCGGCGCG CGGCCGGCCG GCGCGGTTCG GCCGGCCGAC CATGCCGCGC
CGGGCCGGCC CGCCCACCGT CGGCGGCCGG TGGTCGCTGC TGCCGGAGCG GGAACCCGAC
CCGACCCGAC GGGCGCACGC GCTGGCCGAG TCCCTCCTGG ACCGGCACGG CATCGTCACC
CGCGGCGCGG TCACCGCCGA GCGCACGCCA GGCGGATTCG CGGCGGTGTA CCGGGTGCTG
TCGGCGTTCG AGGACGCCGG GCGGTGCCGC CGCGGCTACT TCGTCGAGTC GCTGGGGGCC
GCGCAGTTCG CCGTCCCCGG CGCGGTCGAC CGGCTCCGCG CGATCGCCGG GGCGCAGCGC
GACGCCGCCG ACCAGCCCGC CTGGTCCGCC CCTGATCTGG TCGCCTCCGG TCTCGGCGCC
CAGAGCCTGG GCACCCCGGG TCTGGGGTCG GGCCATGCCG CGGCGGCGCG ACTGGGCGGG
GCCGCGGTGG CGGAGCGGTT CCCGGCCGCC GGGTCCGGGG GTCCGCCAGG CTACGGCGCC
CGCCGCGGGG ACACCAGCGC CGCAGCGGCG GTCGTGCTCG CGGCCAGTGA CCCGGCGAAT
CCCTACGGTG CCGCGCTGCC GTGGCCCAAG CGCCCGGCGG CCGACGGCGA GGGCTCGGGC
CACCGTCCGG GGCGCAAGGC CGGCGCGCTG GTCGTGCTGG TCGACGGCGA GCTCGTCCTC
TACGTCGAAC GAGGCGGCCG CACCCTGCTG TCGTGGTCGG ACGCACCGGG CCTGCTCGGC
CCGGCGGTGG GTGCCCTGGC CGGGGCGGTC CGCACCGGGT CCCTCGGCCG GTTGGCCGTG
GAGAAGGCCG ACGGCGCCGC GGTGGTCGGC AGCGGGCTCG GAGCGGCCCT GGAGCGGGCG
GGGTTCCACC CGACCCCCCG CGGCCTGCGG CTACGAGGGT GA
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| Protein sequence | MSVVGRRLVH VTASDPLAAF SAPTREWFAS SFAAPTPAQA GAWAAVAGGE SALVVAPTGS
GKTLAAFLWS LDSLARSAPP ADPARRCRVL YVSPLKALAV DVERNLRAPL TGIRAAATRL
GLPVPDVSVG VRSGDTPAAE RRAFGRTPPD ILITTPESLF LILTSATREA LRGVETVIVD
EVHAVAGTKR GAHLALSLER LDDLLDVPAQ RVGLSATVRP VDEVARFLGG PRPVTVVRPP
AAKTLHIDVV VPVEDMANLG EVAGAVPEGS AAGAAPRASI WPAVEEKVLD LILGHSSTIV
FANSRRLAER LCARLNELYA DRLATADATG DPDGQETGGW ESGGWESGER AGPAGSRAPA
EIMGAAGSAV SPAEVEVARA HHGSVSREQR MLIEEDLKAG RLPAVVATSS LELGIDMGAV
DLVVQIESPP SVAAGMQRIG RAGHQVGAAS RGVVLPKHRS DLLECAVVAE RMSDGRIEAV
RYPRNPLDVL AQQIVAMVAV EDREVDELGA LVRRAAPFAT LPASAYEAVL DMLAGRYPSD
DFAELRPRIT WDRATGVLAG RPGAQRLAVT SGGTIPDRGM FGVFLVGEKA SRVGELDEEM
VYESRVGDVV LLGSSSWRIE EITPDRVLVT PAPGRPGRLP FWHGDAPGRP AELGRALGAF
LRELSAASPR DAADRVRAAG LDTWATANLL TYLDEQRAAA GHLSDDRRIV VERFRDELGD
WRLAVHSPFG APVNAPWALA IGARLRERYG AEVQIMHTDD GIVARVPDAA EPPEAELVVF
EPEETEALVR AEVGGSALFA SRFRECASRS LLLPRRTPGR RTPLWQQRQR SAHLLSVAST
FGDFPVVLET MRECLQDVYD VPALVGLMRD IGARSLRVVE VETPSPSPFA SSLLFGYVAA
FMYDGDAPLA ERRAQVLSLD SSLLAELLGE AELRELIDPG ALERITAELQ RLVPDRHAHG
VESTADLLRA LGDLTDEEAG ARGVAPSWLA ALADAGRVIR VRIGGEARWA PVEDAGRLRD
ALGVPLPMGV PAAFTEPVRD PLGDLVSRYA RTHGPFEPAA VAARFGLGVA VVVGALERLT
AAGRLVRGEL HPDRAGEQWC DAGVLRALRR RSLAALRKEV EAVPTRAMGA FLPAWQSVTT
GRGHGVDAVL RAVEQLQGAP VPASALEQLV LPARVSDYSS AMLDELCATG EVLWAGAGGL
PGNDGWVTLV LADSAGELLP PPDLDAAGGD LHRAILDALA GDQALFFRTL SDRVGALDDT
ALADALWDLV WAGLVTNDTL AALRVQLGAG RPAHPAHPVP PRRRSARGRP ARFGRPTMPR
RAGPPTVGGR WSLLPEREPD PTRRAHALAE SLLDRHGIVT RGAVTAERTP GGFAAVYRVL
SAFEDAGRCR RGYFVESLGA AQFAVPGAVD RLRAIAGAQR DAADQPAWSA PDLVASGLGA
QSLGTPGLGS GHAAAARLGG AAVAERFPAA GSGGPPGYGA RRGDTSAAAA VVLAASDPAN
PYGAALPWPK RPAADGEGSG HRPGRKAGAL VVLVDGELVL YVERGGRTLL SWSDAPGLLG
PAVGALAGAV RTGSLGRLAV EKADGAAVVG SGLGAALERA GFHPTPRGLR LRG
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