| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1189 |
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| Symbol | |
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| ID | 5669602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1413593 |
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| End bp | 1415782 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641240121 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001505549 |
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| Protein GI | 158313041 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR02696] guanosine pentaphosphate synthetase I/polynucleotide phosphorylase
[TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.266903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGACT CGACACAGGC GGCAGAGGCC GTCATCACGA CCCCGACCGG GGCCCGCACG
GTCCGTTTCG AGACCGGCCG GCTGGCCAGG CAGGCCGCTG GCGCGGTCGT CGCCCACCTC
GGCGACACGA TGGTCCTCTC GGCGACGACG GTCAGCCGCT CGCCGAAGGA GCAGCTGGAC
TTCTTCCCCC TGACGGTGGA CGTCGAGGAG CGGATGTACG CGGCCGGGCG CATCCCCGGC
TCGTTCTTCC GCCGCGAGGG CCGCCCCAGT GAGGACGCGA TCCTCACCTG CCGGCTCATC
GACCGGCCGT TGCGGCCGTC GTTCGCCAAG GGGCTGCGCA ACGAGATCCA GGTCGTGGCG
ACCGTGCTCG CCCTCGACCC CGACACCCTG TACGACGTGG TCGCGATCAA CGCGGCGAGC
GCGTCGACGA TGCTGGCCGG GCTGCCCTTC AGCGGGCCGA TCGGCGCCAC CCGGGTCGGC
TACGTCGACG GCGACTGGAT CGCCTTCCCG ACGCACAGCG AGCTGGAGCG GGCGACCTTC
GACATGGTCG TGGCCGGCCG GGTGCTCGAG GACGGCTCCG ACGTCGCGAT CATGATGGTC
GAGGCGGAGG CGACGCCGGG CACGGTGGCC CTGGTGGCCG GTGGCGCGCC GGCGCCGACC
GAGGAGGTCG TCGCCGCGGG CCTGGAGGCC GCCAAGCCGG CCATCCGCGA GCTGTGCCGG
GCGCAGAGCG AGCTGGCCGC GGGCGCGGCG AAGCCGCAGC GCGAGTTCCC GCTGTTCATC
GACTACCACG ACGACGTGCT GGAGACCCTG ACGGCGGCGG TCGGCGAGGA GCTTGCGGCG
GCACTGCGCA TCGCCGGCAA GGCCGAGCGC GAGACCGAGC TGGAGCGGGT CCGGGCGCTG
GCCGTGGAGA AGGTGTCCGG CCAGTTCGAG GGCCGCGACA AGGAGATCAG CCCGGCCTAC
CGGGCGCTGA CCAAGAAGCT GGTCCGCTCG CGCATCGTCA CCGACGGTGT GCGCATCGAC
GGGCGTTCCA CGACCGAGAT CCGCGAGCTG TCGGCCGAGG TCGACTACAT CCCGCGGGTG
CACGGCTCGG CGCTGTTCGA ACGGGGCGAG ACGCAGATCC TCGGCGTCAC GACGCTGGCG
ATGCTCCGGA TGGAGCAGAC CGTCGACACG CTCAACCCGG ACCGCACCAA GCGGTACATG
CACAACTACA ACTTCCCGCC GTACTCCACC GGTGAGACCG GCCGGGTGGG CTCGCCGAAG
CGGCGCGAGA TCGGCCACGG CGCGCTCGCG GAGCGGGCGC TGCTGCCGGT GCTGCCCAGC
CGCGAGGAGT TCCCCTACGC GATCCGCCAG GTCTCCGAGG CGCTGAGCTC CAACGGCTCG
ACGAGCATGG GCTCGGTCTG CGCGAGCACG CTGTCGCTGC TGAACGCCGG TGTGCCGCTG
AAGGCCCCGG TCGCGGGCAT CGCGATGGGC CTGATCCGGG AGGGCGACGC CTTCGTCACC
CTGACCGACA TCCTCGGGGC AGAGGACGCC TACGGCGACA TGGACTTCAA GGTCGCCGGC
ACGCAGGAGT TCGTGACCGC CCTGCAGCTG GACACCAAGC TCGACGGCAT CCCGGCGTCG
GTGCTCGCCG GCGCGCTGCA GCAGGCGCGG GCGGCCCGGC TGACGATCCT CGAGGTGATG
GCCGAGGCCA TCGGCGGGCC GGACGAGATG TCCGCGCACG CCCCGCGGGT CATCTCCGTG
AAGATCCCCG TTGACAAGAT CGGCGAGGTC ATCGGGCCCA AGGGCAAGAT GATCAACCAG
ATCCAGGCGG ACTCCGGTGC GGAGATCACC GTCGAGGACG ACGGCACGAT CTACATCGGT
GCCGCCGACG GGCCGGCGGC CGAGACCGCC CGCTCCGCGA TCAACGCGAT CGCGAACCCG
CAGATGCCCG AGGTCGGCGA GCGCTACCTC GGTACCATCG TGAAGATCAC GAACTTCGGA
GCCTTCGTCT CGCTGACGCC CGGCAAGGAC GGCCTGCTGC ACGTCAGCAA GCTCAAGCAG
CTCGCCGGCG GCAAGCGCGT CGAAAAGGTC GAGGACGTGC TGTCGGTGGG CCAGAAGCTC
CAGGTGGAGA TCACCGAGAT CGACGCCCGC GGCAAGATCA GCCTCGCGCC GGGCGCGGAG
TCCATCGACA CCGTAAGCGC CGGATCCTGA
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| Protein sequence | MDDSTQAAEA VITTPTGART VRFETGRLAR QAAGAVVAHL GDTMVLSATT VSRSPKEQLD
FFPLTVDVEE RMYAAGRIPG SFFRREGRPS EDAILTCRLI DRPLRPSFAK GLRNEIQVVA
TVLALDPDTL YDVVAINAAS ASTMLAGLPF SGPIGATRVG YVDGDWIAFP THSELERATF
DMVVAGRVLE DGSDVAIMMV EAEATPGTVA LVAGGAPAPT EEVVAAGLEA AKPAIRELCR
AQSELAAGAA KPQREFPLFI DYHDDVLETL TAAVGEELAA ALRIAGKAER ETELERVRAL
AVEKVSGQFE GRDKEISPAY RALTKKLVRS RIVTDGVRID GRSTTEIREL SAEVDYIPRV
HGSALFERGE TQILGVTTLA MLRMEQTVDT LNPDRTKRYM HNYNFPPYST GETGRVGSPK
RREIGHGALA ERALLPVLPS REEFPYAIRQ VSEALSSNGS TSMGSVCAST LSLLNAGVPL
KAPVAGIAMG LIREGDAFVT LTDILGAEDA YGDMDFKVAG TQEFVTALQL DTKLDGIPAS
VLAGALQQAR AARLTILEVM AEAIGGPDEM SAHAPRVISV KIPVDKIGEV IGPKGKMINQ
IQADSGAEIT VEDDGTIYIG AADGPAAETA RSAINAIANP QMPEVGERYL GTIVKITNFG
AFVSLTPGKD GLLHVSKLKQ LAGGKRVEKV EDVLSVGQKL QVEITEIDAR GKISLAPGAE
SIDTVSAGS
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