| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1186 |
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| Symbol | truB |
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| ID | 5669599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1410712 |
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| End bp | 1411653 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641240118 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001505546 |
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| Protein GI | 158313038 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.372827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTTCTT CTGAACGTCC CACGGCGGCC GGACGTCCCA CGGCGGCCGG ACGTCCCACG
GCGGCCGAGC GTCCCGCGGC CGTCGACGGC CTCGTCGTCG TGGACAAGCC CGCCGGCTGG
ACGTCGCACG ACGTCGTCGC GCGGTCCCGG CGCCTGCTGG GCACCCGCCG CATCGGCCAC
GCCGGCACCC TGGACCCGAT GGCGACCGGT GTGCTCGTGC TCGGCGTCGG CCGAGGAACC
CGCCTGCTCG GCCGACTGGC GCTGACCGCC AAGGTGTACG AGGCCACGAT CCGGCTCGGC
CGCACCACCA CGACGGACGA CGCCGAGGGC GACCCGGTGG CGGACCGCCC GGTCGATGTC
GGCGCCGGCC CGCTCGCAGC GGCGATGGCG GAGCTGACCG GGGAGATCGA CCAGGTCCCG
TCCAGTGTCA GCGCGGTGAA GGTCGCCGGG GTGCGGGCCT ACGACCGGGT CCGGGCCGGC
GAGGAGGTGA CGCTCGCGCC GCGGCGGGTC ACCGTCGGCC GGTTCGAGCT GCTCGCCCGG
CGCGGCGAGA CCGACCTGGA CGTCGTCGTC GCCTGCTCGA GCGGGACGTA CATCCGCGCG
CTCGCCCGGG ATCTGGGGGC CGCGCTGGGC TGCGGCGCCC ACCTCACCGC GCTGCGGCGC
ACCGAGGTCG GGCCGTTCGG GCTGGCCGAG GCGGTGACCC TCGACGCGCT CGCCGAGGCC
GCGAACGCGG CCGTCGTGCC GCTGGGGGCA GCGGTGGCGG CGACCTTCCC GCGCCGCGAC
GTGGACGGGG AGCAGGCCCG GGACGTCGCC TACGGGCGGC GGCTGCCCAT GCTCGGCAGC
CCGGGGCCGT ACGGCGTGTT CGGGCCGGAC GGAGCGCTCC TCGCGCTGTT CGAGGAACGG
GACGGCGTGG CCCGCCCGAT CGTCGTCTTC GCGCCCGCGT AG
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| Protein sequence | MPSSERPTAA GRPTAAGRPT AAERPAAVDG LVVVDKPAGW TSHDVVARSR RLLGTRRIGH
AGTLDPMATG VLVLGVGRGT RLLGRLALTA KVYEATIRLG RTTTTDDAEG DPVADRPVDV
GAGPLAAAMA ELTGEIDQVP SSVSAVKVAG VRAYDRVRAG EEVTLAPRRV TVGRFELLAR
RGETDLDVVV ACSSGTYIRA LARDLGAALG CGAHLTALRR TEVGPFGLAE AVTLDALAEA
ANAAVVPLGA AVAATFPRRD VDGEQARDVA YGRRLPMLGS PGPYGVFGPD GALLALFEER
DGVARPIVVF APA
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