| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1176 |
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| Symbol | |
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| ID | 5669589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1400042 |
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| End bp | 1401055 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641240108 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001505536 |
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| Protein GI | 158313028 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00246579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.129694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCTTCT CCTGGTTCGC CCCGGACGCG GTGCCGGCCG TCGACGGGAC ACCCCTCCCG
GACGACCGCA AGCCGCTCGC GGCCGTGGTG TTCGACTGGG GCGGGACGCT CACCCTCTTC
CACGACGTCG ACCTGCTCGA CCTGTGGCGG ATGACCGCGC TGGAGATCTC GTCCGCACAC
GCCGACGAGA TCACCGCGAT CCTGGCTGGC CTGGAGACGA CCTGGTGGCA TGCCCGGGAC
GGCAGCGACG GCCTGGCCGG CAACGGCGCG GCGGGCGGTA TGACCGGGTC GGTCACCGAA
CTGCTTGCGG CCGCCTCCGC GGCCCTCGGC GTGGACGTGG CCGCGGCCGT GCTGCGCGCG
GTCAGCCGGC GCGACCTCGC AGCCTGGACC CCGCACACGG TGTGCGATCC CGAGGCACTG
CTGCTCGTGC ACCTCGTGCG TGCCCGCGGC CTGCTCGTCG GCCTGCTCAC CAACACCCGC
TGGCCACGGG CCTGGCACGA GCGCCTACTC GAACGCGACG GCCTGCTCGA CCTCTTCCAC
GCCAGGATCT ACACGAGCGA CCTCCCTTTC GACAAGCCAC ACCCGATCGC CTTCCAGGCG
GTGCTGGCCG CACTGGGCGT CACCGACCCG TCCCGGGTGC TCTTCGTCGG CGACCGGCTG
CGGACGGACA TCCGCGGCGC GCGGGCGGCC GGCATGCGGG CTGTGCTGGT CGCGGACGGT
GGCTTCGCGG ACGGCGGATT GGCGGACGGC GCCGCGGCGG GCCTCGGCGG TGGTCCCGGC
GGCGTGGTCC TCGATCCGCG TGATCCCCTT GGGCTGGCGG TGGCGGGCCG CGATCTCGCA
GGGCGGGCCG ACCTGGGCCG AGACCCCGCC GCGCGGGATC TGCCCGGTGC GGACGGGGCC
GGGGCGTCCG CGTCGATGCT CGCGGATGCG GTGATCGGCC GCCTCGGCCA CCTGCTCGAG
GTCCTCGACC TGCTCGGCGC CCCCGGGCCT GGGTCACCCG CCCCACGTCG CTGA
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| Protein sequence | MGFSWFAPDA VPAVDGTPLP DDRKPLAAVV FDWGGTLTLF HDVDLLDLWR MTALEISSAH
ADEITAILAG LETTWWHARD GSDGLAGNGA AGGMTGSVTE LLAAASAALG VDVAAAVLRA
VSRRDLAAWT PHTVCDPEAL LLVHLVRARG LLVGLLTNTR WPRAWHERLL ERDGLLDLFH
ARIYTSDLPF DKPHPIAFQA VLAALGVTDP SRVLFVGDRL RTDIRGARAA GMRAVLVADG
GFADGGLADG AAAGLGGGPG GVVLDPRDPL GLAVAGRDLA GRADLGRDPA ARDLPGADGA
GASASMLADA VIGRLGHLLE VLDLLGAPGP GSPAPRR
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