| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1159 |
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| Symbol | |
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| ID | 5669572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1380808 |
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| End bp | 1381842 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641240091 |
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| Product | integrase family protein |
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| Protein accession | YP_001505519 |
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| Protein GI | 158313011 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.226555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGACGG GTGGCGATCC CGCGGCCACG GCCCGCGGTG GCCGTGGTGA CAGCGCTGGT
GGCGGCAACG GCGGCCGCGC TGGCGCAGGT CCTGGTGACG GTGATAGAGG CAGTGGCGGC
GACGGCTGGG CGGGTGCCGT CGAGGCTTTC GTGCGCCATC TGGTCGCCGA ACGGGATCGT
TCGCCGGAAA CCGTCCGGGC CTATCGCGCC GATCTCGCGG GCCTACGTGC GCACGCCGCC
GCGGCCGGCC GTACGGATCT CCTGGACCTG GATCTCGCCG TGCTCCGCGG GTGGCTGGCC
GGCATGCGTT CCGCCGGAGC GGCACCAGCC ACCATCGCCC GCCGTGCGTC CCTCGCCAGG
GTGTTCTCCG CCTTCGCCGC GCGGCGGGGA TTCCTCCCCG ATGACGTCGG GGCGCGGCTG
GCGACCACCC GGGCGCCGCG GCGGATCCCC CAGGTACTCA CCGCGGCACA GGCGGACCGG
CTGCTGGAGA CACGGCCTCG GGGCGATCGT GCGCAGGACC CGCGCGACGT CGCGCTGAAC
CTGCGCGACG ATCTGGTCCT GGAGATCCTC TACGGCAGCG CGGTGCGGGT CTCCGAGCTG
TGCCGGCTCG ACATCGGTGA CGTCGACCAC GAGCGGCGCC TCCTGCGCGT GCACGGCAAG
GGCGGCCGCC AGCGCAGTGT GCCGTTCAGC GTGCCCGCGG CGGGCGCGCT CGACGTCTGG
CTCACCAGGG GCCGGCCCTA CCTCGCGACG CGCGTCGAGG CGGCGCTGCT GCTCGGTGCC
CGTGGCGGCC GGCTCGACCC GCGTTCCGTG CGCCGGCTCG TCCAGGCGCG CGGCGCCGCC
GCGGGGGTTC CCACCGGTCT GACGCCGCAC GGCCTGCGCC ACGGCGCGGC CACCCACATG
GTCGAAGGCG GCGCGGACCT GCGCTCCGTG CAGGAACTGC TGGGCCACGC CAGCCTGTCG
ACCACGCAGA TCTACACCCA CGTCACCCCG GAGCGGCTGC GCGCCGCCTT CGACCAGGCC
CATCCGCGGG CCTGA
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| Protein sequence | MGTGGDPAAT ARGGRGDSAG GGNGGRAGAG PGDGDRGSGG DGWAGAVEAF VRHLVAERDR
SPETVRAYRA DLAGLRAHAA AAGRTDLLDL DLAVLRGWLA GMRSAGAAPA TIARRASLAR
VFSAFAARRG FLPDDVGARL ATTRAPRRIP QVLTAAQADR LLETRPRGDR AQDPRDVALN
LRDDLVLEIL YGSAVRVSEL CRLDIGDVDH ERRLLRVHGK GGRQRSVPFS VPAAGALDVW
LTRGRPYLAT RVEAALLLGA RGGRLDPRSV RRLVQARGAA AGVPTGLTPH GLRHGAATHM
VEGGADLRSV QELLGHASLS TTQIYTHVTP ERLRAAFDQA HPRA
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