| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1049 |
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| Symbol | |
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| ID | 5669463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1229420 |
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| End bp | 1231687 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641239978 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_001505411 |
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| Protein GI | 158312903 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.145385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.795016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGACC GCCTCGCCGG CGGCGCGCAC CACGACCCGC ATGGCGTGCT CGGCGCGCAC
CCCACCCGGG GCTGGACAGT CATCCGCGCG CTGCGCCCCG ACGCCACCGC CGTCACCGTC
CTCGTCGACG GGACGCGCCA CCCGATGACG AGGCTGCACA GCGGTGGGAT CTTCGCCGTC
GCCGTGCCCG GCGGCATCCC CGACTACCGG TTCGAGGTCA CCTACCCCGA CTCGACCCAC
GTGGTCGACG ACCCGTACCA GCACCTGCCG ACGCTCGGCG AGATCGACCT GCACCTGATC
GGCGAGGGAC GTCACGAGCG GCTCTGGCAC GTCCTGGGCG CGCACGTGCG CCGCCTCGAC
CGCGGGCCGG GCGGCGGCGG CGGCGGCGGG ACAGTCGCGG GGGTCAGCTT CGCGGTCTGG
GCGCCGAACG CCCGCGGCGT GCGGGTAGTC GGCGACTTCG ACTTCTGGGA CGGCCGCGGC
TTCCCGATGC GCTCGCTGGG CTCGTCGGGC GTCTGGGAGC TGTTCGTCCC CGGTATCGGG
GCCGGCACCC GCTACAAGTA CGAGATCCTC GGCTCTGACG GCGTGTGGCG GCAGAAGGCG
GACCCGCTGG CCTTCGCCAC CGAGCAGCCC CCGGCCACCG CCAGCGTGGT CCACGAGTCG
AGCTACACCT GGGACGACGC GGCCTGGCTC GAGCGGCGCG CGAGCATCCC CTGGCACGCC
GCGCCGGTCA GCGTCTACGA GGTGCACCTG GCCTCGTGGC GGCGCGGCCT GAGCTACCTC
GAGCTGGCCG AGCAGCTCGT CGAGTACGTG CGCGAGAACG GCTTCACCCA CGTCGAGATG
CTGCCGGTGG CCGAGCACCC GTTCGGTGGC TCCTGGGGCT ACCAGGTCAC CTCGTACTAC
GCGCCGACGT CCCGCTTCGG CAGCCCGGAC GAGTTCCGGC ACCTCGTCGA CGCGCTGCAC
GCCGCCGGGA TCGGCGTGAT CGTCGACTGG GTGCCCGCCC ACTTCCCCCG GGACGCCTTC
GCGCTGGGCC GCTTCGACGG CACCCCGCTC TACGAGCACC CCGACCCGCG CCGCGGCGAG
CAGCCCGACT GGGGCACCTA CGTCTTCGAC TTCGGCCGGT CCGAGGTGCG CAACTTCCTC
GTCGCCAACG CGCTGTACTG GCTGGAGGAG TTCCACGTCG ACGGGCTGCG GGTCGACGCC
GTCGCCTCGA TGCTCTACCT CGACTACTCC CGGCCCTCGG GCGAGTGGGT GCCCAACGCG
CACGGCGGCC GGGAGAACCT GGAGGCCGTC TCGCTGCTGC AGGAGGTCAA CGCGACCGTC
TACCGGCGGG TGCCGGGAGC GATGATGATC GCCGAGGAGT CGACGGCCTG GCCCGGCGTG
ACCCGCCCGA CCCACCTCGG GGGCCTCGGC TTCGGCTTCA AGTGGAACAT GGGCTGGATG
CACGACACCC TCGACTACTC GTCGCGGGCG CCGCTGTTCC GCACCTACCA CCACCACCAG
ATGACGTTCT CGCTGATGTA CGCGTTCTCC GAGAACTTCG TCCTGCCGTT CAGCCACGAC
GAGGTCGTGC ACGGCAAGGG CTCGCTGCTG CGCAAGATGC CGGGCGACCG CCGGGCCCAG
CTGGCCAACC TGCGGGCGCT CTACGGCTAC ATGTGGGCGC ACCCCGGCAA GCAGCTGCTG
TTCATGGGCT GCGAGTTCGC CCAGGACAAC GAGTGGAGCG AGGCCACCTC GCTGGACTGG
CACCTGCTTG GCGAGGCCGG GCACGGCGGG GTGGCCCGCC TGGTCCGCGA CCTCAACCAC
ACCTACCGGG AGATCCCGGC CCTGTGGGAG CGCGACTCCG ATCCGAGCGG CTTCTCGTGG
ATCGACGCCA GCGACGCCGA GAACAACGTC TTCGCGTTCG TACGCTGGGG TGAGGACGGC
GAGCGGGCGC TGGCGTGCGT GACGAACTTC GCCGGCGTCG GCCAGGTCGG CTACCGCCTC
GGCTTCCCGT TCCCGGGCCG CTGGCGCGAG GTGCTCAACA CCGACGCGCT CGACTACGGC
GGCGGCGGCA TGGGCAACCT CGGCGGGATC ACCGCGGTGG CGGACCCGTC GCACGGCCTG
CCCGCCTCGG CGGCCCTGTC ACTTCCCCCG CTGGGCACCG TCTGGTTCGT GCACGAGCCG
GCCGACGGCG GACCTGCCGG CGACGGACCT TCTGCCGACG GGCAGACCGA CAACGAGCTG
ACCGCCAGCG AGCCGGCAGA CGGCGTGCGG TCCGACCCCG AGGCCTGA
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| Protein sequence | MLDRLAGGAH HDPHGVLGAH PTRGWTVIRA LRPDATAVTV LVDGTRHPMT RLHSGGIFAV
AVPGGIPDYR FEVTYPDSTH VVDDPYQHLP TLGEIDLHLI GEGRHERLWH VLGAHVRRLD
RGPGGGGGGG TVAGVSFAVW APNARGVRVV GDFDFWDGRG FPMRSLGSSG VWELFVPGIG
AGTRYKYEIL GSDGVWRQKA DPLAFATEQP PATASVVHES SYTWDDAAWL ERRASIPWHA
APVSVYEVHL ASWRRGLSYL ELAEQLVEYV RENGFTHVEM LPVAEHPFGG SWGYQVTSYY
APTSRFGSPD EFRHLVDALH AAGIGVIVDW VPAHFPRDAF ALGRFDGTPL YEHPDPRRGE
QPDWGTYVFD FGRSEVRNFL VANALYWLEE FHVDGLRVDA VASMLYLDYS RPSGEWVPNA
HGGRENLEAV SLLQEVNATV YRRVPGAMMI AEESTAWPGV TRPTHLGGLG FGFKWNMGWM
HDTLDYSSRA PLFRTYHHHQ MTFSLMYAFS ENFVLPFSHD EVVHGKGSLL RKMPGDRRAQ
LANLRALYGY MWAHPGKQLL FMGCEFAQDN EWSEATSLDW HLLGEAGHGG VARLVRDLNH
TYREIPALWE RDSDPSGFSW IDASDAENNV FAFVRWGEDG ERALACVTNF AGVGQVGYRL
GFPFPGRWRE VLNTDALDYG GGGMGNLGGI TAVADPSHGL PASAALSLPP LGTVWFVHEP
ADGGPAGDGP SADGQTDNEL TASEPADGVR SDPEA
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