Gene Franean1_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1018 
Symbol 
ID5669432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1199121 
End bp1200008 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content65% 
IMG OID641239947 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_001505380 
Protein GI158312872 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.147129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.90193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAGCG GATCGGTGCT CATGGCGGCC GATGACGGCT TCCACGGGCC GACTCCCGAT 
GTCTTCAAGC CGAAGAGCTG GTTCGAGTTC GACCTGGGCC CGATCGACTT CTACTTCAAC
AAGTGGTCCG CGCTGACTCT GTTCGTCGCG CTGTTCGTCG GCGGCTTCCT CTGGCTGGGG
TTCCGCAAGG CGACGCTGGT GCCGCGCGGG CTCCAGAACT TCTGCGAGTC GATCTACGAC
TTCGTCGATC TCCAGATCGC TCAGAACGTC ATCGGCGAGC GAGGCAGGAC GTTCTCCCCG
TACCTGACAA TTCTCTTCTG CTTCATCCTG GTCTCCAACG TCATGGCGGT CATTCCGGTC
GCGCAGTTCC CGACGACGTC GCGAATCGCG CTGCCGATGA TCCTCGCCGC GGTGAGCTGG
TTCATCTTCA ACATCGTCGG TATCCGCGAG CACGGGGCCG GTACCTACTT CAAGGACATG
CTGGTGCCGG CGCCGACCGC GCCGCTGTTC GTGAAGGTCA TCCTGGCTCC GATCGAGTTC
GTCTCGACGA TGATCGCCCG CCCCGCCACC CTCGCCATCC GGCTGTTCGC CAACATGTTC
GCCGGCCACA TGCTGCTGCT GGTCTTCGCG TTGGGCGCCG ACTACCTGCT GCCGAAGCCC
CAGTTCGTGT TCGGGCTGGT CTCCGGCCTG ATGGCGATCG CTCTCACGCT GTTCGAGCTG
ATGATCGACG TGCTGCAGGC CTACATCTTC ACGGTCCTCA CGGCCGCCTA CATCGGCGGC
GCGATCTCCT CGCACGGCGG CGGAGACCAC GCGGCGGACC ACTCCCCGAT CCACGGCCAC
GAAACAAGTG CGCCGGTCAC CGCCGCTGGC GCGGTGGCGC GGGCCTGA
 
Protein sequence
MPSGSVLMAA DDGFHGPTPD VFKPKSWFEF DLGPIDFYFN KWSALTLFVA LFVGGFLWLG 
FRKATLVPRG LQNFCESIYD FVDLQIAQNV IGERGRTFSP YLTILFCFIL VSNVMAVIPV
AQFPTTSRIA LPMILAAVSW FIFNIVGIRE HGAGTYFKDM LVPAPTAPLF VKVILAPIEF
VSTMIARPAT LAIRLFANMF AGHMLLLVFA LGADYLLPKP QFVFGLVSGL MAIALTLFEL
MIDVLQAYIF TVLTAAYIGG AISSHGGGDH AADHSPIHGH ETSAPVTAAG AVARA