| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1007 |
|---|
| Symbol | |
|---|
| ID | 5669421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 1188091 |
|---|
| End bp | 1189044 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641239936 |
|---|
| Product | homoserine kinase |
|---|
| Protein accession | YP_001505369 |
|---|
| Protein GI | 158312861 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0083] Homoserine kinase |
|---|
| TIGRFAM ID | [TIGR00191] homoserine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCA CCGGGCCGGG TGGAGGCCGT CCGCCGGGCG CGGTCCGCCT GCGGGTCCCG
GCCACGAGCG CCAACCTGGG TCCGGGCTTC GACGCGCTGG GCCTGGCACT CGGGCTGTAC
GACGAGGTGT CCGTGCGGCT GACGCCGTCC GGGCTCTCCA TCGACGCGGT CGGCCCGGAC
GCTGTCCCCG CGGACGAGGC GCATCTGGTG GTCCGGGCGA TCCGCGCCAC CTTCGACGAG
CTGGAGTGGG CGCAACCCGG GCTCGCGCTG CGCTGCGTGA ACCGGATCCC GCACGGGCGG
GGTCTCGGTT CGTCCGCCGC AGCGATTGTG GCCGGAGTCA CAGCCGCCGA CGCCCTCGCC
GGCGGGCCGC TCGGTCCGGC CGGGCGGCTG CGGGTGGCCA ACGCGATCGA AGGGCATCCG
GACAACGTCG CGGCGGCCCT GCTCGGTGGC CTCACCGTCG CCTGGTACGA GGGCGATGTG
CCGCGGTCCC TCCGGGTGGC ACCGCTCGGC GAGCTACGGC CCGTGGTGTT CGTCCCATCG
CGACGCCAGT CGACCGAGCA GGCCCGGGGC GCTCTCCCGA AGCAGGTCCC GCATGCCGAC
GCCGCGGTGA ACATCGGCCG CGCGGCGCTG CTCGCGCTCG CGCTGTCCGG CGCGGAACCG
GCGGCCGGCG CTGGCGAGGA ACGCTCGCGG CTGCTGCTGA CCGCGACCGA GGACCGGATG
CACCAGCCGT ACCGCCTTCC CGCCATGCCC GCCTCCGCGG ATCTGGTCGG ACGGCTGCGC
GCCGCCGGCA TACCGGCCGC GCTGTCGGGT TCCGGGCCGT CCGTGGTGGC GCTCGGGGTC
GGTGGCGGAC AGGCCGCGGC GGCGATCGGC GTTGCCGCCC CGGGCTTCTC GGTCGTCCCG
CTGGCTGTCG ACACCGAGGG TGTTCGAGTC GAGGCGGTCG ACTCCTCGGA GTGA
|
|---|
| Protein sequence | MSTTGPGGGR PPGAVRLRVP ATSANLGPGF DALGLALGLY DEVSVRLTPS GLSIDAVGPD
AVPADEAHLV VRAIRATFDE LEWAQPGLAL RCVNRIPHGR GLGSSAAAIV AGVTAADALA
GGPLGPAGRL RVANAIEGHP DNVAAALLGG LTVAWYEGDV PRSLRVAPLG ELRPVVFVPS
RRQSTEQARG ALPKQVPHAD AAVNIGRAAL LALALSGAEP AAGAGEERSR LLLTATEDRM
HQPYRLPAMP ASADLVGRLR AAGIPAALSG SGPSVVALGV GGGQAAAAIG VAAPGFSVVP
LAVDTEGVRV EAVDSSE
|
|---|
| |