| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0886 |
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| Symbol | |
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| ID | 5669300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1031357 |
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| End bp | 1034107 |
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| Gene Length | 2751 bp |
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| Protein Length | 916 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641239813 |
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| Product | peptidase S1 and S6 chymotrypsin/Hap |
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| Protein accession | YP_001505248 |
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| Protein GI | 158312740 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.421013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACACCA CCGGCGACGA CCAGACCACC GATGCCCGTC CTGGCACGGA CAAGGCAAAA
GCCCCGTCAG TGCCCGTGCC CGCGCCCCGC TCGCGGGCGG CGGAGGGCAC CGTCCCGTCG
TCAGGAGGCG TGAGCCGACC GGTCCCGGCG TCCCTGCCGC TGCACGGGCC GGAACGTCGC
CCCGCGACGG AGCGTCGTCC CGGCCCCGAA GCTCGGGCGG ACACGCCGCG CCGCCCCGCG
TCGGCGGCGG AACGGCCACC CTTCGTCGAG CCGGTCCGGG CCACCACACG CGGGAGCGTG
CCGACCACAG GCCGCCCGTC CAGCACGGGG AGCTCGTCCA CGACGGGTAA CGCCGGGGCC
ACCGGCGGCA CACGCGACGA GACGACCAGG CGCGTCGGCG GGAAACGGGA CGGTGCCGGC
CCACGGGGCC CGGCCGCTCG CGCGACATCC GGCCGGGAAC CAGCCGATCG GGAGGCATCC
AGCCGGGAGG CGCCCAGCCG GGCTACGGCC GCACGGGAGG CAGCCGCCGC GCCGAAGGGG
CCGGCGGGCC GGCAGGGCGC CGTCCCGCCG GGGGCGTCGG ATGGTGCCGC TGCCGCGAAG
ACTCCGCTCG TCCGGGAAGG CCGTGCCGCC CAGAACGGCT CGTCTTCTCA GAACGGTTCC
GCTACCCGGG ATGCTGCCGG GCGGAATGGC TCGTCCTCTC AGAACGGCGC CGCCAGCCGG
GACGCCGCCG CGCGGACTGG CTCCATGGGC CCCGAAAGCG TGGCCCGCAC GCCGATCGCG
TCGCCTACCG GGGATCCGGG TCGGCGTGAC ACCGCGTCCC GCGCGGGCGC GCCGGAGCGT
GACGGTGGCG GGCGTGGCGT TCAGGGCACG GGCGCCGCTT CCGGCCCGGG GCCCGCGCCA
GGAGCGGGAT CGGCCCCTGG CGCGCCGGCT GCCCGGGGAG GCTCCGATCC GGGCAGCGCC
GCGAAGGCGC GTGTGACGGC GCAGCCGCGG CCAGCGGTTG CGCGGGAGAG CTCGCGGCCC
TCGGTTCCGC CACCGCAGGG CCCGCTGCCG TCGGCTTCGC GGGAGGCCGT CCCACGGGAG
AGCAGCCGTG AGGCCGTCTC GCGGGAGGGC ACCCGGGGGA GCGTCTCGCG GGAGGTCAGC
CGGGAGGCGG TCTCGCGGGA GAGTGCTCGG GGGAGTGTTC CGCGGGAGGT CAGCCGGGAG
GCGGTCTCGC GGGAGACGGG CCGGGCACCG GTCTCGCGGG AGACCAGCCG TGAGGCCGTC
TCCAGGGACG GTGCCCGGGG GAGCGTCCCG CGGGAGGGCC TCCGTGAGAC GACCTCGCGG
GACGCCGACC AGCGCGGGGC CGGCCGGCCG TTGGCCGACC CGCTGGTGGA TCTGGTGGGG
CCGCGGCGCG CCCCGCGCCC GCCCACGCCG CCGCCCTCGG AGCTTGCGCC ATCCGGTAGG
TCTGCGCCCT CCTCGGCCAC GCCCGCCCCA TCCGCCCCAT CTGTACCAGC GACCTCGGCG
GCTGGGACGT CGGGCGCTGG GAAATCGGCA CCCGCCTCCG CAGCAGGGGG GTCGACGTCT
GGTGTGTCCA CGACCGATGC GGCCAGAGCA ACGGCCGACG CGGCGAGAGC CGCGAGCGCG
GCGACGCACC ACCGCGCGGC CGCTCCGAAG ATCCGCCATG GCCGGCGGGC GCTCGTGATC
ACTGCTGTGA TCGCCGGACT GCTGGGGGGA GCGACCGGTG GGTGGGTGAC GAGCCTGATA
CTGGGTGACT CCGAGGGGAC GTCGTCGCCG ACAGCGTCCG CCGAGGCCGC GCCGACGGTC
ATCGACCCCG GCTCGGTGGC CGGGGTCGTC GCGCGAGTGC TGCCGTCCGT TGTGACCATC
GACGTGACGG CGGGGGCCGA GGGCGGGAAC GGCTCCGGGG TGATCATTCG GTCTGAGGGC
TACGTACTCA CCAACAACCA TGTCATCGCG CCGGCGGCGA ACGCGGGTGG CCAGGTAATG
ATCACGATGA GTGATGGCGC CGAGCCCGTG CTCGCCGAGA TCGCCGGACG GGACGCCTCT
TCAGATCTTG CGGTGCTGCG CATCCCCGGG GCCTCCGGCC TGCCGGCGGC GACGCTGGGA
CGGTCCGGTT CGCTGGTCGC CGGCGCTCCG GTGATCGCGA TCGGTGCGCC CTTCGGACTC
TCGGGGACGG TCACCACGGG GATCGTCAGC GCGCTCGACC GGAACCCGAC CGTGCCCGCC
GAGGGCGGCG GGGCGTCCGT GATCATCGGA GCGATCCAGA TCGACGCGGC GATCAATCCC
GGGAACTCCG GTGGCCCGCT GCTCGACGCC CGTGGCCAGG TCGTCGGCCT GAACACGGCG
ATCGCGACGG CGCCGGGCGG GCAGGCGCCG TCGGGCAGCG TCGGCGTCGG GTTCGCGATC
CCCATCGACT ACGCCGCGTC GGTGGCGGAC GAGATCATCC GCACCGGGCG GGCCACCCAC
CCCTACACCG GAGTGTCGGC CGCGACGGTC ACCGCCGCCG AGGCCCGGGC GCGCGGCACC
ACCCCGGGCG CGATCATCCG TGACGTCGAG CCGGCGGGCC CCGCGGCCGC GGCCGGGCTG
CTGCCGGGCG ACATCATCAC CCGGGTCGAC GACACGGTCG TCACCAGCAC GAACGATCTC
ACCGCGGCCA CCCGGCTGCA CCACGTCGGC GACACGGTGA CCGTGACCTT CCAGCGCAAC
GGAGTGGAGA GCACAGCGCG GGTGGTCCTC CAGGAACAGT CGCCCGGCTG A
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| Protein sequence | MDTTGDDQTT DARPGTDKAK APSVPVPAPR SRAAEGTVPS SGGVSRPVPA SLPLHGPERR
PATERRPGPE ARADTPRRPA SAAERPPFVE PVRATTRGSV PTTGRPSSTG SSSTTGNAGA
TGGTRDETTR RVGGKRDGAG PRGPAARATS GREPADREAS SREAPSRATA AREAAAAPKG
PAGRQGAVPP GASDGAAAAK TPLVREGRAA QNGSSSQNGS ATRDAAGRNG SSSQNGAASR
DAAARTGSMG PESVARTPIA SPTGDPGRRD TASRAGAPER DGGGRGVQGT GAASGPGPAP
GAGSAPGAPA ARGGSDPGSA AKARVTAQPR PAVARESSRP SVPPPQGPLP SASREAVPRE
SSREAVSREG TRGSVSREVS REAVSRESAR GSVPREVSRE AVSRETGRAP VSRETSREAV
SRDGARGSVP REGLRETTSR DADQRGAGRP LADPLVDLVG PRRAPRPPTP PPSELAPSGR
SAPSSATPAP SAPSVPATSA AGTSGAGKSA PASAAGGSTS GVSTTDAARA TADAARAASA
ATHHRAAAPK IRHGRRALVI TAVIAGLLGG ATGGWVTSLI LGDSEGTSSP TASAEAAPTV
IDPGSVAGVV ARVLPSVVTI DVTAGAEGGN GSGVIIRSEG YVLTNNHVIA PAANAGGQVM
ITMSDGAEPV LAEIAGRDAS SDLAVLRIPG ASGLPAATLG RSGSLVAGAP VIAIGAPFGL
SGTVTTGIVS ALDRNPTVPA EGGGASVIIG AIQIDAAINP GNSGGPLLDA RGQVVGLNTA
IATAPGGQAP SGSVGVGFAI PIDYAASVAD EIIRTGRATH PYTGVSAATV TAAEARARGT
TPGAIIRDVE PAGPAAAAGL LPGDIITRVD DTVVTSTNDL TAATRLHHVG DTVTVTFQRN
GVESTARVVL QEQSPG
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