Gene Franean1_0855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0855 
Symbol 
ID5669271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1001895 
End bp1002263 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content70% 
IMG OID641239784 
Producthypothetical protein 
Protein accessionYP_001505219 
Protein GI158312711 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000353066 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.184371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACCC GAACGTCACC ATCGCAACAT CCGGACTGGC GGATCCGTGC AGTACTGTCA 
CGACGTGCCC AACACGCCGG ATTACCAGGG GCGCACTCGT CGCCCCTGGT GGCGGGCGTG
CCGGTGCGGC CACACGCAGG ATTCGCACCG ACATTACCGA CCAGACAGCG ACTGCGGCGA
ATGCGACTGC CCACGGTTCA CCCGGGTGCG TCGCCGCACC GGTCGTTCGG GTGCGCCACC
GCCGTAGCGA CGTCCATCCG GAGGACGTCG ACCGGGGCAC GGTCGATCCC GGCGCTTGAC
GGCCGTGACG GCCATGGCGG CCGTCATGTG TCGGGTGTGG TGACGACCGC CCTCACGGCG
GGGTCCTGA
 
Protein sequence
MGTRTSPSQH PDWRIRAVLS RRAQHAGLPG AHSSPLVAGV PVRPHAGFAP TLPTRQRLRR 
MRLPTVHPGA SPHRSFGCAT AVATSIRRTS TGARSIPALD GRDGHGGRHV SGVVTTALTA
GS