Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0855 |
Symbol | |
ID | 5669271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 1001895 |
End bp | 1002263 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641239784 |
Product | hypothetical protein |
Protein accession | YP_001505219 |
Protein GI | 158312711 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000353066 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.184371 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCACCC GAACGTCACC ATCGCAACAT CCGGACTGGC GGATCCGTGC AGTACTGTCA CGACGTGCCC AACACGCCGG ATTACCAGGG GCGCACTCGT CGCCCCTGGT GGCGGGCGTG CCGGTGCGGC CACACGCAGG ATTCGCACCG ACATTACCGA CCAGACAGCG ACTGCGGCGA ATGCGACTGC CCACGGTTCA CCCGGGTGCG TCGCCGCACC GGTCGTTCGG GTGCGCCACC GCCGTAGCGA CGTCCATCCG GAGGACGTCG ACCGGGGCAC GGTCGATCCC GGCGCTTGAC GGCCGTGACG GCCATGGCGG CCGTCATGTG TCGGGTGTGG TGACGACCGC CCTCACGGCG GGGTCCTGA
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Protein sequence | MGTRTSPSQH PDWRIRAVLS RRAQHAGLPG AHSSPLVAGV PVRPHAGFAP TLPTRQRLRR MRLPTVHPGA SPHRSFGCAT AVATSIRRTS TGARSIPALD GRDGHGGRHV SGVVTTALTA GS
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