| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0852 |
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| Symbol | |
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| ID | 5669268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 998673 |
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| End bp | 1000499 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 641239781 |
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| Product | hypothetical protein |
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| Protein accession | YP_001505216 |
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| Protein GI | 158312708 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00483421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.421013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACGG CCTCGTCGGC GGGTGCGCGC GGCGGCGCGG GACGGCGGAG CGGGCGCGAC
CGGCCCGCGA GCGCCGGCGC GGCCACCACC GGCACGACCA CCGCCGCAGC CGCGGCCGTC
ACCACGGTGA CGGCCGCGCT GCTCGCGGCC GCCTTCTGGG CCTGGGCGGC ACACCGGGTC
CCGGCGGTAG ACGTCGCCGC GGACGCCACC GTCGTGCTGG GTCTGCGGGT CATCGTCTCG
CTCGCGCGCG CCGCCGCGCC CGGACCCGGC GCGCGGCACC GGCTGCGCGC CGGAGCCCTG
GCCGCGCTCG GAGCGGTCAC CCTGGCCTGG GCCGGTGGAT CGCTGATCCC AAGCCTGTCC
TTCCTCGCCG CCACCCCCGG TTTCCTCATC CTCCTGCCGC TGGCGGCCGC CAGCGTCGCC
CTCTGGCCGG CGCGCCCCGA CGTGTGGCGG TTCGACGCGT CCCAGGACTC ACCGAACCGC
CGCACATCGG CGGCCGGGAT GTTGGTCGCC GCGGGGGCGT GGGTGGCGCT GGGCGCCGTT
CGGGTGGGCG CGCTGGTGTT CGCCGCGGAC GTCGCGGCGC GGGGCGGGGC GGGGCATGCG
CACGTCGCCC TGCTCGCATG GCTGGCGCCG GTCGCCCTGG CGGCCGGTCC ACGCTGCGGA
TGGCTGCTCT GGCGGACGAA CGCGGACCCC GGCCTCGCCT CATCCCGTGT GGCCACCCCG
GCGGGGCGGC AGCGCCCCGT CCGGCGGCTC GGCGCCCCCC GGCGGACGAC GACGACGGCG
CGAGCCGTCC CCGCGCCGGA GTGGGAGCCG CCGGCTCCCG GGTCACGCCC GGGCCCCGGA
TCGCTCCCAG CCCGCGGATC GCAACCCGCT CCGGGATCGC TCCCGACCCG CGGCTCGCCA
CCAGCTCCCG GCTCGCTCCC CGCTGCCGGG TCACCGTCGG AGCGAGGATC AGTGGTCCGG
CCCAGCGCGC AGCGGTGGGC GCAGGGCCCC CAGCGACCGC CCAGGTCACG GCGCCCCTCG
CTACCACCGA CGAGGTCGCC GCAGGCGCCG ACCCCGCGGT CACCGTTCTC GGCACTGCCC
ACAGCTCCGC CCAGCAGGAC GCCGTTCGGC AGGACGCAGG TGGATGAGGC GGCGCGGCGA
TCGCTCACGT CACTCGCGGC CGAGCCGGCC GCGCCGGAGC CTGCGACGCG GGTGCTCTGG
TCGGCGGCGG CGGCCGGACT GGCCCTGGTC GTCCTCGATC ACCAGGTCGG CCCGGCGAGC
GCCGCCTTCG CCCTGGCCGT GCTCGCCATC CTGGCCGTCG GCGGGTTCGT CGGCGGCCGT
GGGGCCGCGA CGCTGCCGTG CGTGGCCGTC GCGCTGGTCG CCGCGCCGCT GCCGCTGGCC
GTGCTCGGCG ACGAGTACGC CGATCAGGGA ACAGCCGGGC TCCGCCTGCT CCTGGCCGCC
CTCGCGATCG ACGCCCTGCC AACCGGCGCC CAGCCGTCCA GCGGGGTGCG GGCGGCCGCG
CGGCCGGTGA TCCGGCGCGG GGCCACGGTG GCTGGGCTGA CCGTTCTGGT GGCCATACTC
CCGATCATGC TGGCGGCCTG GGGTGCCGAG GGGGCCGCGC TCGCGCTGCT GCTCGGCCGG
GTGGTCGCCG TGGCGCCTGT GGTCCGCCTG CCGGCGCGCC GCGAGCGCGC CGCCGAGCCG
GCCGCCGAGG CCCCCGGGCA ATCCCGGCCC GCCGGAGCCG CGCCGGCCGC CGTCGACCGC
CGCCCAGAGG CGGCCGGCCG CGGCGGGAGA CGCGCCCGGA TGGCCAGGTT CGCGCCGGGA
GTCAGTCACC CATCTCGGTC ACTGTAG
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| Protein sequence | MTTASSAGAR GGAGRRSGRD RPASAGAATT GTTTAAAAAV TTVTAALLAA AFWAWAAHRV
PAVDVAADAT VVLGLRVIVS LARAAAPGPG ARHRLRAGAL AALGAVTLAW AGGSLIPSLS
FLAATPGFLI LLPLAAASVA LWPARPDVWR FDASQDSPNR RTSAAGMLVA AGAWVALGAV
RVGALVFAAD VAARGGAGHA HVALLAWLAP VALAAGPRCG WLLWRTNADP GLASSRVATP
AGRQRPVRRL GAPRRTTTTA RAVPAPEWEP PAPGSRPGPG SLPARGSQPA PGSLPTRGSP
PAPGSLPAAG SPSERGSVVR PSAQRWAQGP QRPPRSRRPS LPPTRSPQAP TPRSPFSALP
TAPPSRTPFG RTQVDEAARR SLTSLAAEPA APEPATRVLW SAAAAGLALV VLDHQVGPAS
AAFALAVLAI LAVGGFVGGR GAATLPCVAV ALVAAPLPLA VLGDEYADQG TAGLRLLLAA
LAIDALPTGA QPSSGVRAAA RPVIRRGATV AGLTVLVAIL PIMLAAWGAE GAALALLLGR
VVAVAPVVRL PARRERAAEP AAEAPGQSRP AGAAPAAVDR RPEAAGRGGR RARMARFAPG
VSHPSRSL
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