| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0836 |
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| Symbol | |
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| ID | 5669252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 979423 |
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| End bp | 980085 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641239765 |
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| Product | DNA repair protein RadC |
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| Protein accession | YP_001505200 |
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| Protein GI | 158312692 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2003] DNA repair proteins |
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| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00741803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGGTGA AGGATCTTCC GATACGGGAA CGGCCACGCG AGCGAGCCCT GGCCGCGGGC
GCCGAGGCAC TCGCCGATCG CGAGCTGCTG GCGCTCCTGC TCGGGTCGGG CTCGCCCGGC
TGTGACGCGG TCGATCTCGC CGGGCGGCTC ATCGCCCGGC ACGGCGGGCT GTACGAGCTC
TCACGGGCCG ACCCGCAGGA GCTGATCGCG CAGCCCGGGG TGGGGCCGGC GAAGGCGGCC
CGGGTCTGCG CGGCCTTCCA CCTGGGCCGG CGCGCCCGGC CCCCGGCGGC CGGCGCCACC
GGGCTGACCA GCACGGCGGC ACTGGCCGAG GCCGCCGCGC CGCTGCTGCG CGGCCTGCGC
GGCGAGCGTG TCGTCGTGGT CGTCTGCGAC GGCAACGCGG GCATCCTGCG GGCGCGGCTG
CTCACGCAGG GCGCGTCCGG CCACAGCCCG CTGAGCATGC GCGACCTGCT CGGCTACGTG
CTGCGCTGCG GGGGCTCGGC GTTCGGAGTG GCCCACAACC ACCCCGACGG CAACCCCGAG
CCGAGCGCGG ACGACCGCCG CGTCACCACC CGGCTCCGGG AGTCGGCCGC GCTGCTGGGC
CTGCGCTTCC TCGACCACGT GGTCATCACC GACGAGACGT GGCGCCGGGT GGTCGACGCC
TGA
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| Protein sequence | MRVKDLPIRE RPRERALAAG AEALADRELL ALLLGSGSPG CDAVDLAGRL IARHGGLYEL
SRADPQELIA QPGVGPAKAA RVCAAFHLGR RARPPAAGAT GLTSTAALAE AAAPLLRGLR
GERVVVVVCD GNAGILRARL LTQGASGHSP LSMRDLLGYV LRCGGSAFGV AHNHPDGNPE
PSADDRRVTT RLRESAALLG LRFLDHVVIT DETWRRVVDA
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