| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0832 |
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| Symbol | |
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| ID | 5669248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 973315 |
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| End bp | 974136 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641239761 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_001505196 |
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| Protein GI | 158312688 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.53621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGAGTC GCGCGGTAGG CAGTACGCGG AAACGTAGGA TCCATCACGC ACCGGGACGG
ACTGACCGCC GCTGGTCGGC TCCGCTTCGT GACCCCGATG CCGACCCGAT ATCGTTCTGC
CCCGTGGCCT CCCCCGCGCG GCAGACCGCC GGCTCCGACG ACGCGACCCC GAACTCCCAT
CCGCGTGACC TGGTGCGACC GCGCATGCGG GGGTGGCTAC ACACCGGAGC ATTCCCCGTG
AGCCTCGCAC TCGGCGTCAT TGCGGTGGCA CTGGCCACGA CACTGAGGGC CCGCCTCGGG
GTGGCCGTTT ACGCGATCAG CATTGCCGCA CTGTTCGGAA CCAGTGCCCT CTATCACCGA
AAAATGTGGT CGACCTCACG CGCCCGCTCG CTGATGAAGC GCCTCGACCA CTCTATGATC
TTCATTTTCA TCGCCGGCAC CTACACCCCA TTCGCCCTCA TCGCGATGCC GGAGCACACC
GCACGCATCG TGCTGGCCGT CGTCTGGGGC GGCGCGGCGC TGGGCGTGCT GGTGCGCATG
CTGTGGCTGC ACTCGCCGCG CTTCCTGATC GTCCCGCTCT ACATCGCGCT GGGCTGGGTC
GCCGTCTTCG TCATACCCGA GCTGATGCAC CAGGCCGGCG TGGCCGCGAT GGTCCTGCTA
CTGGTGGGCG GCGCCTGCTA CAGCCTCGGC GCGCTGGTGT ACGCCACCCG CCGGCCTGAC
CCGGCGCCCA GCACCTTCGG GTACCACGAG GTGTTCCACG CATTCACCCT CGTCGCCGCC
GGCTGTCACT ACATAGCACT GATGATCGCC ATGCTCGGCT GA
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| Protein sequence | MQSRAVGSTR KRRIHHAPGR TDRRWSAPLR DPDADPISFC PVASPARQTA GSDDATPNSH
PRDLVRPRMR GWLHTGAFPV SLALGVIAVA LATTLRARLG VAVYAISIAA LFGTSALYHR
KMWSTSRARS LMKRLDHSMI FIFIAGTYTP FALIAMPEHT ARIVLAVVWG GAALGVLVRM
LWLHSPRFLI VPLYIALGWV AVFVIPELMH QAGVAAMVLL LVGGACYSLG ALVYATRRPD
PAPSTFGYHE VFHAFTLVAA GCHYIALMIA MLG
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