Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0806 |
Symbol | |
ID | 5669222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 943502 |
End bp | 945457 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641239734 |
Product | signal peptide peptidase SppA, 36K type |
Protein accession | YP_001505170 |
Protein GI | 158312662 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0494755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0402011 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGGAA CGCCCAGACA GGTGGTCGCC GACGTCCAGC GGATCGCGCG GCGGCGCAAC GCCCCGATCG TGCTCGAGCT CGACCTGACG TCCGATCCGG TCGAGGGCGT GCCCACGGAC CCGCTGACGG CGGCGGTCTC GCACCGGCGG ACCGGCCTGC GGGAGATCGT CGACGGGCTG CGCCGAGCGG CTCGGGACGA GCGCGCGAGC GTCGTCGTGG CGCACGTCGC CGCCTGCGGG ATGCCGCTGG CGCGGGTGCA GGAGATCCGG GACGCCGTCG CCGAGTTCCG GGCCTCCGGC GGGGCCGCCT ACGCCTACGC GGACACCTTC GGCGAGTTCG GCGGCGGCAC CGTCGCCTAC TACCTGGCCT GCGCGTTCGA CGAGATCTGG CTCGCGCCGC CCGGTGACCT GGGCCTGACC GGCGTCGCGA TGGAGACCCC GTTCGTGCGC GACGCGCTCG ACCGGCTCGG TGTCACCGTT GAGATCGGCC AGCGCCACGA GTACAAGAAC GCGGTGAACA CGCTGGTGGA GCGGGACTTC ACCCCCGCCC ACCGGGAGGC GCTGGCCCGC ATCGTCGACT CCAGCGCCGA GCAGATCGTC GCCGGGATCG CGCAGAGCCG GGGCCTGTCG GCCGACCAGG TCCGGCGCAT GATCGACATC GCGCCGCTGG CCGGCCACGT GGCGCTCTCC GCCGGCCTCG TCGACCGCAT CGGCTACCGC GACGAGATCT ATGAGTACGC CCGGGAGCGA GCCCGCGCGC TGGCCGGCCG GGACCCGGGC GATGACGCCG GGGAGACGGT CGAACCGGTT CTGAGGTACG TCTCCGCCTA CCGGCGGGCG GCCGTCCGCA AGGCCGAGTC GCCGGTGCGC CGCGCCGGGT CGTTCGCCTC GTCGCTGCCG GCGACGATCT TCCTGCGCGA GTCCGGCCGT TCCCGCACGG GAACGGCCGG TGGTCCCGGG GACGAGAGAC CGGCCGGCGC GGCGGGCCCG TCGCGGGCGG GCGCGGACGT GGTGCCGCCG GAGATCGATC CGCACACGTC GGTGGTGGCG CTCGTGCACG GCACCGGGCC GGTGGTCCTC GGCGGAGCCA CGATGCCCTT CTCGGGGCCG GTGTTGGCCG CCGACGCCGT CACGGCAGCG TTCCGCGCCG CCGCACGTGA TCCTTCTGTG GCCGCCGCGG TCTTTCGGGT GGAGAGCCCT GGAGGCTCCT ATGTGGCCTC GGACGTGGTC CGTCGGGAGA TCGAACGGTT CCGATCCACA GGCCGTCCAG TAGTGGTCTC GATGGGCTCG GTGGCCGCGT CGGGCGGGTA CTTCGTCGCG CTCGCGGGGG ACGTGATCGT CGCGAACCCG GGAACGCTGA CCGGGTCCAT CGGTGTCTTC GGTGGCAAGC AGGTCGTGCG CGACCTGTTC GACAAGGTCG GCATCGGCTT CGGCGCCGTC GCCGCCGGCG AGAACGCGCT GATGATGTCC CCGCGCCAGC CGTTCACCCA GGCCGGGCGG GCGAAGCTGG ACGAGTTCCT CGACCGCGTC TACGCCGACT TCGTGGACAA GGTCGCCCAG GCCCGCCGCA TGTCGCACGG CGACGCCCAC GAGCTCGCCC GCGGCCGGGT CTGGACGGGC GCCGACGCCC ACCGTCACGG TCTGGTGGAC GAGCTGGGCG GGCTGGCCCA CGCGATCGAC CTCGCCTGGG CCCGGGCCGG CCTGCCGGCA GGGGAGACGC CCAGGGTGCG GCTCACGCCG AAGTCGTCGG TGTTCGACCG GCTGCGCGCG CCGAAGTCCA GCGAGGAGCC GGCCGCGGCG TCCGCGCTGG CACCCGGGCT GGGCGCCGGG CTCGCCGGCC TCGGGCTGCG CGGCGCGCTG CTCGTCGGCG AGCGGCTCCT GGGGGCTGGC CTGGCCCGGG CGGGCCTGCC GGGTGCCGGC CCCCTGGTGA TGCCGCCGGT CGGCGAGATC CGTTAG
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Protein sequence | MVGTPRQVVA DVQRIARRRN APIVLELDLT SDPVEGVPTD PLTAAVSHRR TGLREIVDGL RRAARDERAS VVVAHVAACG MPLARVQEIR DAVAEFRASG GAAYAYADTF GEFGGGTVAY YLACAFDEIW LAPPGDLGLT GVAMETPFVR DALDRLGVTV EIGQRHEYKN AVNTLVERDF TPAHREALAR IVDSSAEQIV AGIAQSRGLS ADQVRRMIDI APLAGHVALS AGLVDRIGYR DEIYEYARER ARALAGRDPG DDAGETVEPV LRYVSAYRRA AVRKAESPVR RAGSFASSLP ATIFLRESGR SRTGTAGGPG DERPAGAAGP SRAGADVVPP EIDPHTSVVA LVHGTGPVVL GGATMPFSGP VLAADAVTAA FRAAARDPSV AAAVFRVESP GGSYVASDVV RREIERFRST GRPVVVSMGS VAASGGYFVA LAGDVIVANP GTLTGSIGVF GGKQVVRDLF DKVGIGFGAV AAGENALMMS PRQPFTQAGR AKLDEFLDRV YADFVDKVAQ ARRMSHGDAH ELARGRVWTG ADAHRHGLVD ELGGLAHAID LAWARAGLPA GETPRVRLTP KSSVFDRLRA PKSSEEPAAA SALAPGLGAG LAGLGLRGAL LVGERLLGAG LARAGLPGAG PLVMPPVGEI R
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