| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0789 |
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| Symbol | |
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| ID | 5669205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 916336 |
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| End bp | 916905 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641239717 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001505153 |
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| Protein GI | 158312645 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0961669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.201216 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCTCA CGCCCACCGC CATCGACGGC GTGACGATCG TCGACGTCGA GGCGTTCTCG
GACGACCGCG GCCTGTTCGC GCGCACCTTC TGCCAGGAGG AGTTCGCCGC CGCCGGGCTG
GAGGTGGCCG TCGCGCAGTG CAGCGTCGCC TACAACCGCC GTGCCGGGAC GATCCGCGGC
CTGCACTGGG CCGGCGAGCC GGTGCGCGAG ACCAAGCTGG TCCGCTGCAC CCGCGGCGCC
CTGCTGGACG TCATCGTCGA CTCGCGGCCC GGCTCGGCGA CCTACCTGGA ACACGTGGCC
GTGGAGCTGA CCGCGGACAA CCACCGGGCG TTGTTCATCG CCGCCGGGCT CGCGCACGGC
TACCAGACCC TGGTGGACGA CACCGAGGCC ACGTACCAGA TGAACGTCCC GTTCACTCCG
GGGCATGACC GTGGTCTCCG TTTCGACGAC CCCCGGCTCG GGATCGCCTG GCCGCTGCCC
GTCTCGGTGA TCTCGGAGAA GGACCGCGGC TGGCCGCTGC TGCCCGCCGG CGTCCCGGGC
GACGAGCTCA TCCAGCTCGG CCAGACCTGA
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| Protein sequence | MKLTPTAIDG VTIVDVEAFS DDRGLFARTF CQEEFAAAGL EVAVAQCSVA YNRRAGTIRG
LHWAGEPVRE TKLVRCTRGA LLDVIVDSRP GSATYLEHVA VELTADNHRA LFIAAGLAHG
YQTLVDDTEA TYQMNVPFTP GHDRGLRFDD PRLGIAWPLP VSVISEKDRG WPLLPAGVPG
DELIQLGQT
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