Gene Franean1_0759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0759 
Symbol 
ID5669175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp885942 
End bp886964 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content72% 
IMG OID641239686 
Productglycosyl transferase family protein 
Protein accessionYP_001505123 
Protein GI158312615 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0160185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGTGC TGGTCGTGTC CTACAACACC GCCGAGCTGA CGGTCCGGTG CCTGGAGTCC 
GTCCTGGCTG AGCCGGCCGG GGCCGAGATT GAGATCATCG TCGTAGACAA CGCCTCGACG
GACGGCTCCC CGGACGCCAT TCGGGACGCG TTCCCGGCGG TGCGGCTGAT CGAGTCGGCG
ACGAACCTCG GATTCGGCCG CGCGATCAAC CTGGCGGCCT CCCACGCCGG CGGGGACTAT
CTGCTCCTGC TGAACCCCGA CGCCGTCGTC CTCGATCGGG CGGTCGCCGA GATCCTCACC
TTCGCCCGCG GGAACCCGGC CTGCGGGCTC TACGGCGGGC GGACGCTGCG GCCAGACGGA
TCGGTCGACC CGAGCTCCTG CTGGGGGGCA CCCAGCCTGT GGAGCCTGGC GTGCTTCGGG
GTCGGCCTGT CGACGATGTT CCGCGGATCG AGGATCTTCG ATCCGGAGTC GCTCGGGCGC
TGGCAGCGCG ACAGCGTCCG CGAGGTCGGT GTCGTCACCG GATGCCTGCT GCTGGTCAGA
CGCGACCTCT TCGAACGGCT GGGCGGGTTC GACCCCCGGT TCTTCATGTA CGGGGAGGAC
ACCGACCTGT CGATGCGGGC GCGGGCCGCC GGCTACCGCC CCACGATCGT CCCGACCGCG
GCGATCGTGC ACCACGTCGG GGCCTCGTCC TCGAACTGGG CGGCCAAGCA CGTGCTCGTC
CTCCGCGGGA AGACCACGTT GGCGAGGAAG CACTGGACGG GGTGGCGGCA GGGGTTCTGC
CTGGCGATGA TCGTTCTTGG GGTGGCGCTG CGGGCCCTGG CCGATCTGGG GTCGGGGCTG
GCCCGTGGGC GGCCGCGGGC GCGTGCGAGC GACTGGCGCG CGCTCTGGCG CCGGCGGCGG
GACTGGTGGC CCGGCTACCC CCCGTACACC GAGCCCACGG GCGGCGTCCC CAGCCAGTCG
CGCGTCCCGC CCGAGCCCGC ATCCGGCACG TGTCACCCGT CCCGACATCT GACGAGGCCA
TGA
 
Protein sequence
MSVLVVSYNT AELTVRCLES VLAEPAGAEI EIIVVDNAST DGSPDAIRDA FPAVRLIESA 
TNLGFGRAIN LAASHAGGDY LLLLNPDAVV LDRAVAEILT FARGNPACGL YGGRTLRPDG
SVDPSSCWGA PSLWSLACFG VGLSTMFRGS RIFDPESLGR WQRDSVREVG VVTGCLLLVR
RDLFERLGGF DPRFFMYGED TDLSMRARAA GYRPTIVPTA AIVHHVGASS SNWAAKHVLV
LRGKTTLARK HWTGWRQGFC LAMIVLGVAL RALADLGSGL ARGRPRARAS DWRALWRRRR
DWWPGYPPYT EPTGGVPSQS RVPPEPASGT CHPSRHLTRP