Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0724 |
Symbol | |
ID | 5669140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 840918 |
End bp | 841577 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641239651 |
Product | hypothetical protein |
Protein accession | YP_001505088 |
Protein GI | 158312580 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00634276 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0883262 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACAG GCCGAGGCAT GCTCATCGTG GCGTCACTGT CGCTCGCGGC GTCGGCCGCC GGCTGCGGTG GGTCGGACGG ACCGGCGGAC CAGGCTGTGT CGGCTCCGCC GGGCCCGCCG GTCGTCTCCG GGACCAGCCA GCCGCCGGCC GCGCCCACCG CGCGGCCGAC CGCCGTGACG GGCTCGACCG GCCCGTCCGC CGGGATCCCG GTCACGGGTG CCGGCGGTGC CGGGCCGGCC TGCGCCTCCA CCGGCCTCGC CGCGTCCCTC GAGGACGTCC AGGGCGCGGC GGGCCACGTC TACGGGCGGA TCGTGCTCAG GAACACCGGT CCCGGCACCT GCTCGGTCGT CGGCTACCCC GGTGTGTCGG TGGTGGACGC CACCGGTGGC CAGGTCGGGG CGGCGGCTGA CCGCACGGGG CCGGCCGGCA CCCCGGTGAC GCTGCCACCG GGCGGCAGCA CCGGCGCGAC GCTGGCGATC ACGCAGGCCG GGCTGCTTCC GGGCTGCGAG GAACCAGGTC AGGCGGTGCG GGGCGCGAAT CTGCGCGTGT ACCCGCCCGA CGACCGTGGG AGCCTGCTCG CGGCACTGCC GGCCGGTGTC GAGACGTGTC GGGATCCGGC TGTGCACCAG CTCGCGGTCG GTGCCTTCGG CCAGCCCTGA
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Protein sequence | MRTGRGMLIV ASLSLAASAA GCGGSDGPAD QAVSAPPGPP VVSGTSQPPA APTARPTAVT GSTGPSAGIP VTGAGGAGPA CASTGLAASL EDVQGAAGHV YGRIVLRNTG PGTCSVVGYP GVSVVDATGG QVGAAADRTG PAGTPVTLPP GGSTGATLAI TQAGLLPGCE EPGQAVRGAN LRVYPPDDRG SLLAALPAGV ETCRDPAVHQ LAVGAFGQP
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