Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0722 |
Symbol | |
ID | 5669138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 839317 |
End bp | 840135 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641239649 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001505086 |
Protein GI | 158312578 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0102858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0961586 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCCCCC TGCTCGAGGA TCCGACCGGC AAGCGGAACC GCGCGCGGCG CGCACGGGCG GTCCCGTCGT GGGCGCGTCG GCTGGCCGGT CCGGCGCTGC TGCTGCTCGG GTGGTTCACG GTCACCGGGT TCGACGTGGT CAGCGACCGC GCGTTCGCCT CGCCCGGCGC GGTGCTCGAC GCCGCCCGGG AGCTGTGGGG TACGGGCGAG CTGGCCGACA ACCTCGGTAT GTCCCTCTAC CGGGTCGGCT GGGGATGCGT CCTCGGGGTG GCGGTCGGCC TGGCGCTCGC CGTGATCGCC GGGTTCTTCC GGTTCGGGGA GGACGTCGTC GACTCGGCGA TGAACTTCCT GCGCACCATT CCGATCATTG CCCTGCTCCC GCTGATCATC GTGTGGATCG GCATCGGCGA GGAGGCGAAG ATCTTCCTCA TCACCGCCGG CGTGATCTTC CCGGTCTACA TGAACACCTT CGCCGGGATC CGGAGCGTGG ACATCAAGCT CGTCGAGGCG GGCCGGGCCT TCGGGCTCGG CCGGGCCGGT CTCGTCCGGC GGGTGATCAT TCCCGGTGCC CTCCCGGGCT TCCTGGTGGG GCTGCGCTGG TCCCTCGGCG TCGCCTGGCT GCTGCTGGTG TTCGCCGAGC AGGTCAACAC CGATTCCGGC ATCGGCTACC TGCTCAACCG CGCCCAGGGC TGGAACCGCA CCGACATCAT GGTGCTCTGC CTGGTGATCT ACGGAATCCT CGGCCTGCTC TGCGACGGCC TCGTCCGCCT GCTGGAAAGG AGCCTGCTGT CATGGCGACG CGGATTCTCC GGGACCTGA
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Protein sequence | MAPLLEDPTG KRNRARRARA VPSWARRLAG PALLLLGWFT VTGFDVVSDR AFASPGAVLD AARELWGTGE LADNLGMSLY RVGWGCVLGV AVGLALAVIA GFFRFGEDVV DSAMNFLRTI PIIALLPLII VWIGIGEEAK IFLITAGVIF PVYMNTFAGI RSVDIKLVEA GRAFGLGRAG LVRRVIIPGA LPGFLVGLRW SLGVAWLLLV FAEQVNTDSG IGYLLNRAQG WNRTDIMVLC LVIYGILGLL CDGLVRLLER SLLSWRRGFS GT
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