| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0717 |
|---|
| Symbol | |
|---|
| ID | 5669133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 834159 |
|---|
| End bp | 834980 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641239644 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001505081 |
|---|
| Protein GI | 158312573 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0940778 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGACA TGCGGCGTGG GGCGCGGGTT CTCGGCGGCA GTCACCACTA CGAAGGTGAC
CGGCTCGTCA CCGGCTGGCA TTCCCACGAT CTGCACCAGA TCGAGTACGC CATTTCCGGG
ATGGTCGAGG TCGAGACCGC CGGCACCCAC TACCTCCTGC CGCCGCGGCA GGCAGCGTGG
ATCCCGGCCG GTCTCGAGCA CCGGGTGACG ATCAACTCGG CGGTCCGCTC GATCGCCGTG
CTGTTCGACC CCCGGCTGAT CGACCGACCG GGGGACCGCG CCCGGATCCT CGCCGCGCCG
CCGCTCGTCC GGGAGATGAT GATCTACGCT CGGCGCTGGC CGATCACCCG CCCGAGCGGT
GATCCGGTGT CCGACGGCTT CTTTCGCACG CTCGGCCACC TCGTCGTCGA GGCGCTCGGT
CACGAGGCTC CGCTGAGCCT GCCGACCTCG ACCGATCCGG TCGTCGCCGC GGCCATCTCC
TATACCCAGC GCCACCTCGA CGCGGTCTCC GTGGCCGAGG TCGGCCGGGC GGTCGGCGTC
TCGGAACGGA CCCTGCGCCG CCTGTTCCGC ACCGCCCTCG GCCTCTCGTG GCGGCACTAC
CTGGTGCAGG CCCGGCTGCT GCGGGCGATG GCGCTGCTCG CCGACCCCAC CCGGTCGGTG
CTCGAGGTGT CGACCGCCGT CGGCTTCGAG AGCCCGAGCG CCTTCGCCCG GGCCTTCGCC
CAGTATTGCG GCGAGCGCCC GTCGGCCTAC CGGCAGCGGA TCGGGGTGGT CCCTCCGGCC
CTGGCCCCGG TGGGACGGCG TCCGCACCGC GGTGGGCGCT GA
|
|---|
| Protein sequence | MVDMRRGARV LGGSHHYEGD RLVTGWHSHD LHQIEYAISG MVEVETAGTH YLLPPRQAAW
IPAGLEHRVT INSAVRSIAV LFDPRLIDRP GDRARILAAP PLVREMMIYA RRWPITRPSG
DPVSDGFFRT LGHLVVEALG HEAPLSLPTS TDPVVAAAIS YTQRHLDAVS VAEVGRAVGV
SERTLRRLFR TALGLSWRHY LVQARLLRAM ALLADPTRSV LEVSTAVGFE SPSAFARAFA
QYCGERPSAY RQRIGVVPPA LAPVGRRPHR GGR
|
|---|
| |