Gene Franean1_0664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0664 
Symbol 
ID5669081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp780020 
End bp780463 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content72% 
IMG OID641239591 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_001505029 
Protein GI158312521 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.535186 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCTA CGTCGGTTCC GATGAACGTG GTGCGGCAGG CGAGTTCGTG TCGCCCACCG 
GCCACGCACA TCCTCGCCGA GCTGCCCTAC CTGCCGTCCG CCGTCCCGCA GGCGCGGCGG
GTCCTCCGTG AGTGCCTGGG TCTGACCGGC CTGCCCGACG ACACGCGGTG CACCGCCGAG
CTGCTGGTCA GTGAACTCGT CACCAACGCG GTCAAGTACG GGCGGCCACC GGTGTGGCTG
CTGGTCGAGC TGCGGCCGGG CCTCGTCCAC GCCTCGGTCT CGGACACGTC GACCACCCTG
CCGCAGCGCC GCGAGGTCGA CCCGGACGCC GAGGGCGGCC GCGGCCTGCT CGTCCTGGAC
GCCCTGGCCG GCAGCTGGGG CGCGGTGTCG GTGGAGTCCG GCAAGTACCT CTGGTTCGAC
CTCCCGGTCA TCCGGACGCC CTAG
 
Protein sequence
MSPTSVPMNV VRQASSCRPP ATHILAELPY LPSAVPQARR VLRECLGLTG LPDDTRCTAE 
LLVSELVTNA VKYGRPPVWL LVELRPGLVH ASVSDTSTTL PQRREVDPDA EGGRGLLVLD
ALAGSWGAVS VESGKYLWFD LPVIRTP