| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0661 |
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| Symbol | |
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| ID | 5669078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 775401 |
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| End bp | 776855 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 641239588 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001505026 |
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| Protein GI | 158312518 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000151703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.871149 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGGC CGGGTCACCG CCCGGCCGAC GAGTTGCGGG ACCTGCTCGG CGTCGCCCTG
GGCGCGCTCG ACGCGGGCCG CCGCGACCGG GTCGGCCCGC TGCCGGCCGG CGGGCCGGTG
GCCGTCCGGC GGGTGGCGCT GGCCGCGCTC GGCGGGGGGC GGCTGCTCAC CGCGGCGGGC
AGCGGCGAGG CCGCGGCCCT CGACGCCCTC ACCCGCATGC TCTCGGCGGG CTCGGCCGAC
CCCGCCGACC CGTTCTGCGC GGCGCACCTG CACTGCCCGC CGCTGCCCGT CGCCGTAGCC
GCCGATCTCG CGGTCAGCGC GCTCAACCCG TCGCTGGACT CCTGGGACCA GGCCCCGGCC
GCGACGACGG TCGAGACGGA GGTCGTCGCC GCGCTGGCCG AGCTGGCCGG CCTGGACCCG
GCGCGCGCGG TGGGCACGGT GACCACCGGC GGCACCGAGT CCAACCTGAT GGGGCTGCTG
ATCGGCGCTC AAGGCCGCGG CGGTGGCGGC GGCGGCGTTG TCGGGCCGCG GGTCGCCGTC
CTCTGCTCGG CGGCCGGCCA CCATTCGGTG CGCCGCGGCG CCGAGCTGCT GGGGCTCGGC
GAGGTGGTCA CCATCCCGGT CGACGGCGCG CACCGGATGG ACGTCGGCGC GCTGCGGGCG
GCGCTGGCCG GCCACGGCGG GCCCGCCCTC GTCGTCGCGA CGGCGGGCAC GACGGACGCG
GGCGCCATCG ACCCGCTGGG CGAGATCGCC GCGGCGGTGC GTGCGCACCC TGCACCCGGC
TGGCTGCACG TGGACGCGGC CCACGGCGGC GGCGCCCTGT TCTCCCACCG GCTGTCCGGG
CTGCTCGCCG GGCTGGCCGA GGCCGACTCG ATCGCCCTCG ACCTACACAA GCTGGGATGG
CAACCGGCCC CCGCGGGGAT CTTCCTCACC CCGTCCGGCC GCGGGTGGGA GCGGCTGGAG
ACCGAGGCCG CCTACCTCAA CCCCGCCGAC GAGACCGCCG CCGGCTACCC GAGCCTGCTG
GGCCGGTCGC TTCGCACCAC CCGCCGGCCG GACGCATTCA AGATCGCCGT GACCCTGCGC
GCGCTGGGCC GGGACAGGCT CGGCGCCCTG GTGGACGCCT GCCACCGCCT CGCCCGGCAC
GCCGCGGCCG TCATCGAGGC GGACCAGCGG CTCGCGCTCT CGGCACCGGT GGCCCTCAGC
ACCGTGCTCT TCCGCTACGT CCACGACCGG GAGACGGGGG GCCGGGAGGC GCTGGACCGG
CTGAACGCGG CGATCCGGCT CCGGCTGCTC GCCGAGGGCG CGGCGGTCGT CGGGCGGACC
ACGGCCGGGG TGGACGGCGC CGTCCACCTC AAGCTGACGC TGCTGAACCC GGCCGCGACG
CCGGCCGACG TCACCGCCCT GCTCGCCCTC GTCGCCGCGA CCGGCGACCG GCTGGCCGCC
GAGCCGGCGG CGTGA
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| Protein sequence | MTRPGHRPAD ELRDLLGVAL GALDAGRRDR VGPLPAGGPV AVRRVALAAL GGGRLLTAAG
SGEAAALDAL TRMLSAGSAD PADPFCAAHL HCPPLPVAVA ADLAVSALNP SLDSWDQAPA
ATTVETEVVA ALAELAGLDP ARAVGTVTTG GTESNLMGLL IGAQGRGGGG GGVVGPRVAV
LCSAAGHHSV RRGAELLGLG EVVTIPVDGA HRMDVGALRA ALAGHGGPAL VVATAGTTDA
GAIDPLGEIA AAVRAHPAPG WLHVDAAHGG GALFSHRLSG LLAGLAEADS IALDLHKLGW
QPAPAGIFLT PSGRGWERLE TEAAYLNPAD ETAAGYPSLL GRSLRTTRRP DAFKIAVTLR
ALGRDRLGAL VDACHRLARH AAAVIEADQR LALSAPVALS TVLFRYVHDR ETGGREALDR
LNAAIRLRLL AEGAAVVGRT TAGVDGAVHL KLTLLNPAAT PADVTALLAL VAATGDRLAA
EPAA
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