Gene Franean1_0616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0616 
Symbol 
ID5669033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp716898 
End bp717428 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content78% 
IMG OID641239543 
Producthypothetical protein 
Protein accessionYP_001504981 
Protein GI158312473 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.11399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCCG GCCCCGCGGC GGCGTCCGCA CCGGCCGGCC CGGCGGGGGC GTCCGGCTCG 
GCCGGCCCGG CGGCGGCGCC CGAGCCGACG CGGCCGGTAC CGGCGCCGGA CGAGCGTTCG
GCGCCGTACT GGGCGGCCGC GGCGCGGCAC GTCCTCACCG TCGCCCGCTG CGCCCGCTGC
TCCACCTACG TCGTGCCGCC GGACCACACC TGCCCGCACT GCGGCAGCAC CGATCCCGGG
TTCGCCTTCG AGCCGGTGAG CGGCAGGGGC ACCGTGCGCT CCTGGACCGT GGTCCGCCAG
TCGTTCCTGC CCGGCTTCCG CGGCGAAGTG CCCTTCCTCC TCGTCGACGT CGAGCTCGCG
GAACAGCCTG AGCTGCGCAT CATCGGCCGG CTCCTGGACG GCCCCGACAC CACCCTGCGC
ATCGGCGCAC CGGTGGCGGT GGCCTTCGAG GACGTCGCCG ACGGCGTCTC CGTCCCCGCG
TTCGCCCTGG CCGAGTCGAG TGCCACTGGC CCCGGCGAGG TGCGGTCGTG A
 
Protein sequence
MTAGPAAASA PAGPAGASGS AGPAAAPEPT RPVPAPDERS APYWAAAARH VLTVARCARC 
STYVVPPDHT CPHCGSTDPG FAFEPVSGRG TVRSWTVVRQ SFLPGFRGEV PFLLVDVELA
EQPELRIIGR LLDGPDTTLR IGAPVAVAFE DVADGVSVPA FALAESSATG PGEVRS