Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0616 |
Symbol | |
ID | 5669033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 716898 |
End bp | 717428 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 641239543 |
Product | hypothetical protein |
Protein accession | YP_001504981 |
Protein GI | 158312473 |
COG category | [R] General function prediction only |
COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.11399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGCCG GCCCCGCGGC GGCGTCCGCA CCGGCCGGCC CGGCGGGGGC GTCCGGCTCG GCCGGCCCGG CGGCGGCGCC CGAGCCGACG CGGCCGGTAC CGGCGCCGGA CGAGCGTTCG GCGCCGTACT GGGCGGCCGC GGCGCGGCAC GTCCTCACCG TCGCCCGCTG CGCCCGCTGC TCCACCTACG TCGTGCCGCC GGACCACACC TGCCCGCACT GCGGCAGCAC CGATCCCGGG TTCGCCTTCG AGCCGGTGAG CGGCAGGGGC ACCGTGCGCT CCTGGACCGT GGTCCGCCAG TCGTTCCTGC CCGGCTTCCG CGGCGAAGTG CCCTTCCTCC TCGTCGACGT CGAGCTCGCG GAACAGCCTG AGCTGCGCAT CATCGGCCGG CTCCTGGACG GCCCCGACAC CACCCTGCGC ATCGGCGCAC CGGTGGCGGT GGCCTTCGAG GACGTCGCCG ACGGCGTCTC CGTCCCCGCG TTCGCCCTGG CCGAGTCGAG TGCCACTGGC CCCGGCGAGG TGCGGTCGTG A
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Protein sequence | MTAGPAAASA PAGPAGASGS AGPAAAPEPT RPVPAPDERS APYWAAAARH VLTVARCARC STYVVPPDHT CPHCGSTDPG FAFEPVSGRG TVRSWTVVRQ SFLPGFRGEV PFLLVDVELA EQPELRIIGR LLDGPDTTLR IGAPVAVAFE DVADGVSVPA FALAESSATG PGEVRS
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