| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0601 |
|---|
| Symbol | |
|---|
| ID | 5669018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 697782 |
|---|
| End bp | 700046 |
|---|
| Gene Length | 2265 bp |
|---|
| Protein Length | 754 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641239528 |
|---|
| Product | potassium-transporting ATPase subunit B |
|---|
| Protein accession | YP_001504966 |
|---|
| Protein GI | 158312458 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2216] High-affinity K+ transport system, ATPase chain B |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01497] K+-transporting ATPase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACCA CCACCATCGC CGCGCACCAG GACGGCGCCA GCGCCGCCGG CCGGCGGGAA
ACGCAGCCGG CCCGACCGCG GCGGGTCGGG GGCGGTCTGC TCGACCCGAA GCAGCTTTGG
ACGTCCCTGC CCAGCGCGGT GCGCAAGCTC GACCCGCGGA CCCTGTGGCA CAACCCGGTC
ATGCTGATCG TCGAGGTCGG CGCCGCGTAC ACCACCGTTC TCGCGATCAT CGACCCGTCG
GCGTTCGGCT GGATGATCAC GGTCTGGCTG TGGCTCACCG TGATCTTCGC CAACCTCGCC
GAGGCCGTCG CGGAGGGGCG CGGCAAGGCG CAGGCCGCCG CCCTGCGCCG GGCCAGGACC
GAGACCGTCG CCCGCCGGCT CGTCGGCTGG CGCGCGGGCC AGCCCGTCGA GAGCGCCGCG
GTCGAGAGCG TGCCGGCGCC GCGGCTCGCC CAGCACGACC TGGTCGTGGT CGAGGCGGGG
GAGCTCATCC CCGGGGACGG TGACATCGTC GAGGGCATCG CCAGCGTGGA TGAGTCGGCG
ATCACGGGCG AGTCGGCGCC GGTGATCCGG GAGTCCGGTG GTGACCGGTC CTCGGTCACC
GGCGGGACGA GGGTGCTCTC CGACCGGATC GTCGTCCGGA TCACCCAGAA GCCCGGGGAG
AGCTTCATCG ATCGGATGAT CGCCCTGGTC GAGGGCGCGA ACCGGCGTAA GACGCCGAAC
GAGATCGCGC TCAACATCCT GCTGGCCGCG TTGACCGTCA TCTTCCTGCT GGCCGTCGCC
ACGCTGCAGC CGCTGGCGAT CTACTCGAAG GCCCAGCAGC CGGCGCTGCC GGACAGCTCC
ACCCTGACCG GTGACGGGAT CACCGGGATC GTGCTCGCGT CCCTGCTGGT CTGCCTGATC
CCGACCACGA TCGGAGCGCT GCTTTCCGCG ATCGGCATCG CCGGGATGGA CCGGCTCGTC
CAGCGCAACG TGCTCGCGAT GAGCGGCCGG GCGGTGGAGG CCGCCGGCGA CGTCAACACG
CTCCTGCTCG ACAAGACCGG CACCATAACC CTGGGGAACC GGCAGGCCAG CGCGTTCCTC
GCCGTCGGCG GCGTGAGCGA GGCGGAGCTG GCGGACGCCG CCCAGCTCTC CTCGCTCGCC
GACGAGACCC CCGAGGGCCG CTCGGTCGTC GTGTTCGCCA AGGAGCACCA CGGCCTGCGC
GAACGCACCC CGGGCGAGCT GGCGCACGCG ACGTTCGTGC ACTTCACCGC CCAGACCAGG
ATGTCCGGCG TCGACCTGGC GCCCGAGCCC ACCGGCCCGG GCGCGCCCGG CGCCCCCGGG
ACGTCCAGCG CCGTCGGCGC CCGGCGGGTT CGCAAGGGGG CGGCAAGCGC GGTCACCCGG
TGGGTGCGGG AGAACGGGGG GCAGGTACCC GCCCAGGTCG GGGAGATCGT GGACGGTATC
TCCGCCTCGG GCGGTACCCC GCTGGTCGTA GGCGAGGTCA TCGACGGCCC GTCCGGCCCG
TCCGGCCCGT CCGGCCCGGC CGCGCGGGTG CTCGGCGTCA TCCAGCTCAA GGACGTCGTG
AAATCCGGCA TGCGGGAGCG CTTCGACGCC ATGCGCCGGA TGGGTATCCG CACCGTGATG
ATCACCGGGG ACAACCCGCT CACCGCGAAG GCGATCGCCG ACGAGGCGGG TGTCGACGAC
TTCCTCGCCG AGGCGACTCC GGAGGACAAG CTCGCGCTGA TCCGCAGGGA GCAGGCGGGC
GGCAAGCTCG TCGCGATGAC CGGCGACGGC ACCAACGACG CGCCCGCGCT CGCGCAGGCC
GACGTCGGGG TGGCCATGAA CACCGGCACG TCGGCCGCGA AGGAGGCCGG CAACATGGTC
GACCTCGACA GCAACCCGAC GAAGCTCATC GAGATCGTCG AGATCGGCAA GCAGCTGCTC
ATCACCCGCG GGGCGCTGAC GACCTTCTCC ATCGCCAACG ACGTCGCCAA GTACTTCGCG
ATCATCCCGG CGATGTTCGC CGGCGTCTAC ACCGGCCTGG ACAGGCTCAA TGTCATGCGG
CTGGCCAGCC CCGAGTCGGC GATCCTCTCC GCGGTCATCT TCAACGCCCT CGTCATCGTC
GCGCTGATCC CGCTCGCGCT GCGCGGTGTG CGCTACACCC CCGCCAGCGC GTCGAAGCTG
CTCAGCCGCA ACCTCTACGT CTACGGCCTC GGTGGGATCG TCGTCCCGTT CGCCGGCATC
AAGGTCATCG ATCTTCTCGT CCAGTTCATC CCGGGAGTGG GCTGA
|
|---|
| Protein sequence | MSTTTIAAHQ DGASAAGRRE TQPARPRRVG GGLLDPKQLW TSLPSAVRKL DPRTLWHNPV
MLIVEVGAAY TTVLAIIDPS AFGWMITVWL WLTVIFANLA EAVAEGRGKA QAAALRRART
ETVARRLVGW RAGQPVESAA VESVPAPRLA QHDLVVVEAG ELIPGDGDIV EGIASVDESA
ITGESAPVIR ESGGDRSSVT GGTRVLSDRI VVRITQKPGE SFIDRMIALV EGANRRKTPN
EIALNILLAA LTVIFLLAVA TLQPLAIYSK AQQPALPDSS TLTGDGITGI VLASLLVCLI
PTTIGALLSA IGIAGMDRLV QRNVLAMSGR AVEAAGDVNT LLLDKTGTIT LGNRQASAFL
AVGGVSEAEL ADAAQLSSLA DETPEGRSVV VFAKEHHGLR ERTPGELAHA TFVHFTAQTR
MSGVDLAPEP TGPGAPGAPG TSSAVGARRV RKGAASAVTR WVRENGGQVP AQVGEIVDGI
SASGGTPLVV GEVIDGPSGP SGPSGPAARV LGVIQLKDVV KSGMRERFDA MRRMGIRTVM
ITGDNPLTAK AIADEAGVDD FLAEATPEDK LALIRREQAG GKLVAMTGDG TNDAPALAQA
DVGVAMNTGT SAAKEAGNMV DLDSNPTKLI EIVEIGKQLL ITRGALTTFS IANDVAKYFA
IIPAMFAGVY TGLDRLNVMR LASPESAILS AVIFNALVIV ALIPLALRGV RYTPASASKL
LSRNLYVYGL GGIVVPFAGI KVIDLLVQFI PGVG
|
|---|
| |