| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0575 |
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| Symbol | |
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| ID | 5668992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 666727 |
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| End bp | 668487 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641239502 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001504940 |
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| Protein GI | 158312432 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAAC TCCGCAACGT CGTCGTTTCT GCACATAGTC CGTGGCGTCT GACCGGTTCG
GGCCGTACGC CACGAGTGTT GCGGTGCGCC ATCGCCGCCT CCCTGGCGCT GCTGGGGCTG
GATGTCGCCT TCGCGGTGCT GCTGGACCTG CGCTCCGCCC GCGTCGCCAC GGACCTCGTC
TCCACCGCAG CCCAGTTCGC CGCCGCGGCC GCCTGTTTCT GGACCGCCCG GCGGGTACGC
GGGGCGGAGC GCCGCTGGCG GGTGCTCATC GGTCTCACCG CCGCCGGAGC GATGCTCGCC
AGCCTCTCGA TCGCACCGAC GTTGCTGGCC GGAGACCTGC CCCACAGGCA AGGCATGTCC
CCGGCGTATG CCGTCTTCCT CTCCCTCTAC GGGGTGGCCC TGGCCGGGCT GCTGTCCCTG
CCCACCGACC CGGTGGACAG CCGGGGCGGG AGTGCTGGCA GGCGATGGTA CGGCGCCCAC
CGCTGGTATG CGATCACCCT GCTGGACTGC CTGCTGATCG CCGGCTCGCT CGTCCTGCTG
CAATGGGGGA CGGTGCTCTC CGCGGTCGTC CAGACGGGCC CCGACATCAG ACCATTCCGG
CTCGCCCTGA CCCACCAGGG TGCCGGCCTG ATCCTCGCCA CCGCGGTCGT GCTGATCGCC
AGCTTCCGCC GACCCCGCGC CCCCGCAACG CTGGCACTAC TGGGCACCGG CCTGCTGGCC
TACGGACTCA CCACCAACAT CATCTCCTAC GTCGCCGCGG AGTACGGGTT CCACCTGCCG
CCCTGGGGCC TGATCGGGTT CGCTCTCGCC TACCTGCTGG TCTTCCTCGC CGCGTTCGTC
CCGGTCCCGA CCCGCACGCC CCCCGAGGGC CCCGCCCCGC CCAGCCCGCG GGCGATGTGG
GCACACGCCG CGCTGCCCTA CGCCGCGCTC ACCGCCGCGG GCCTGCTGAT CCTGGGCAAG
CTGGCCACCG GTGCCCGCCT CGACCGGTTC GAGACCTACG GCATGATCAC ACTGCTGGTG
CTCGCCCTGC TCCGGCAGAT GGTCACCCTC GCAGAGAACA CCCGGCTACT CGCCGAGATC
CGGGAACGCG AACGGCAACT GCACCACCAG GCGTTCCACG ACCCGCTGAC CGGCCTGGCC
AACCGGACAC TGTTCACCCG CCGGCTGCAA CGAGCCCTCA CCCAAGGCAC CGACAGCGAC
ACCACCCACA CCCCCGCCAT CACCTCCGGC GAGGACACGG TGTCCGTCCT GTTCCTCGAC
CTTGACGGCT TCAAAAAGGT GAACGACACG TTCGGCCACG CCGTCGGCGA CGAACTCCTC
CAGATCAGCG CCGACCGGCT ACGCGCGGAA ACCCGCGCGA TCGACACCGT CGCCCGCCTC
GGCGGCGACG AGTTCGGCGT CATCCTCGAC GGCGGCGGCC CCGACGACCC CCGCCGCATC
GGCGAACGGC TCGCCACCGC CGTCCAGGCC CCCTGCCTGC TGGCGGGGCG GCCTTACACC
CCCCGCGCCA GCCTCGGCCT GGTCACCCTC GACAGCACCA CCACCCGACC CGCCACCCCC
GACATCCTGA TCCACCAGGC CGACCTGGCC ATGTACACCG CCAAACGCAC ACAAACCGGC
GGACTCGTCA TCTACCAACC CGACCCGTCC ACCCCCACGA CCACCACCAA CCATCATCCC
GACCACCCGA CACGATCGGT TGAAAGTTCG GTTTGTGGGT TTCGGGACCG CCCGGCGCAC
GATCCGGGTC CCGTTCCGTG A
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| Protein sequence | MPELRNVVVS AHSPWRLTGS GRTPRVLRCA IAASLALLGL DVAFAVLLDL RSARVATDLV
STAAQFAAAA ACFWTARRVR GAERRWRVLI GLTAAGAMLA SLSIAPTLLA GDLPHRQGMS
PAYAVFLSLY GVALAGLLSL PTDPVDSRGG SAGRRWYGAH RWYAITLLDC LLIAGSLVLL
QWGTVLSAVV QTGPDIRPFR LALTHQGAGL ILATAVVLIA SFRRPRAPAT LALLGTGLLA
YGLTTNIISY VAAEYGFHLP PWGLIGFALA YLLVFLAAFV PVPTRTPPEG PAPPSPRAMW
AHAALPYAAL TAAGLLILGK LATGARLDRF ETYGMITLLV LALLRQMVTL AENTRLLAEI
RERERQLHHQ AFHDPLTGLA NRTLFTRRLQ RALTQGTDSD TTHTPAITSG EDTVSVLFLD
LDGFKKVNDT FGHAVGDELL QISADRLRAE TRAIDTVARL GGDEFGVILD GGGPDDPRRI
GERLATAVQA PCLLAGRPYT PRASLGLVTL DSTTTRPATP DILIHQADLA MYTAKRTQTG
GLVIYQPDPS TPTTTTNHHP DHPTRSVESS VCGFRDRPAH DPGPVP
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