Gene Franean1_0571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0571 
Symbol 
ID5668988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp657818 
End bp658441 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content67% 
IMG OID641239498 
Productisoprenylcysteine carboxyl methyltransferase 
Protein accessionYP_001504936 
Protein GI158312428 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.537112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCC GATGGACAAC GATTGTCGTA GTGATCTGCT GGGGGCTCGT GACACTGGTG 
TGGCTCACCG GAGCGGCGTT CAACCGGCGG CGGGCGCCTC GGGTGCTGGC GCGATCCCGG
CCGAAGATCC TGCGCCTGCT CGGCCCACTC GCCGCGACGG CGTGGATCGT GACCGAGCTG
GCCCATCGGC AGATCGGCCT TCCGGCGGAG GAATGGCTCA GCACCATCGC GCTCTGCGCC
CTTCCTCTGT GCGCCGCGTT CACCACATGG GCCAGATTCT CACTCGGCAC CATGTGGACC
CCGGCACCCT GCGTGCGACG AGACCACGTC CTGCGAACCA GCGGACCATA CGCGATGATC
CGCCACCCGA TCTACACTGG CGTCCTGGGA ATGGCGTTGT GCACCGCGGC AACAACCCGG
CAGGCCTGGC TGCTGGCGGT GTTTCTGGTT GCCGTTGTCA CGCTGAATAT CAAGATCCGT
TCGGAGGAGC GGATAATGCG CCAGGCCTTT CCCGCCGACT ACGACCGGTA CCGCCGCCGA
GTGCCTCGCC TCGTCCCGTC TCCCTTCCTC CACGTGAAGT CCAGGCAGCG CTCGCGGACG
GCGTCACCTG AAGCCATCCG GTGA
 
Protein sequence
MSGRWTTIVV VICWGLVTLV WLTGAAFNRR RAPRVLARSR PKILRLLGPL AATAWIVTEL 
AHRQIGLPAE EWLSTIALCA LPLCAAFTTW ARFSLGTMWT PAPCVRRDHV LRTSGPYAMI
RHPIYTGVLG MALCTAATTR QAWLLAVFLV AVVTLNIKIR SEERIMRQAF PADYDRYRRR
VPRLVPSPFL HVKSRQRSRT ASPEAIR