Gene Franean1_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0564 
Symbol 
ID5668981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp648063 
End bp648569 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content69% 
IMG OID641239491 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001504929 
Protein GI158312421 
COG category[R] General function prediction only 
COG ID[COG2514] Predicted ring-cleavage extradiol dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.474023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGGG TGCAGTTGGC ACTGAACGTG TCCGACGTGG ACGCGGCAGT GGAGTTCTAC 
ACGAAGCTGT TCGGGGTCGA GCCCGCGAAG CGCCGGCCGG GGTACGCGAA CTTCGCCGTC
GAGGTGCCGC CGTTGAAGCT GGTGCTGATC GAGAACCCGG ACGCTCGTGG CACTGGGGTG
GCGGGGGCGC TGAACCATCT CGGGGTGGAG ATCGAGACCT CGGAGGAGGT GTCCGCCGCC
GCGACCCGGT TGCAGGACTC GGGGCTGGTG ACGGCGGTGG AGGAGAACAC GGCCTGCTGC
TATGCGTTGC AGGACAAGGT GTGGGTCGAT GACCCGGACG GCGCGCCGTG GGAGATCTAC
ACGGTGCTCG CCGACATCGC TGAGAGCACC GGCACGCAGC TGCGCACCGT CGAACCAGGT
GACGGTCCGG GTTCCGCGTG TGATTGCGGG CCGGTCTGCG CCCCCAGGGT GACGATCGAA
CCGGCACCCG CCGGCGTTAC CCGCTGA
 
Protein sequence
MARVQLALNV SDVDAAVEFY TKLFGVEPAK RRPGYANFAV EVPPLKLVLI ENPDARGTGV 
AGALNHLGVE IETSEEVSAA ATRLQDSGLV TAVEENTACC YALQDKVWVD DPDGAPWEIY
TVLADIAEST GTQLRTVEPG DGPGSACDCG PVCAPRVTIE PAPAGVTR