| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0541 |
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| Symbol | |
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| ID | 5668958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 626542 |
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| End bp | 627879 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641239468 |
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| Product | protein serine phosphatase with GAF(s) sensor(s) |
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| Protein accession | YP_001504906 |
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| Protein GI | 158312398 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2203] FOG: GAF domain
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATAATG CGCCGGCGCC GGAAGGGACC GGGCCGGCAC GTGACGCGGG CCCCGACCAG
GCTGCCTCGG TATTGCTCCG CGCCGAGCCG GAGGAGCCCT TCGACCGGCT GACCCGCCTG
GCGGCAGTCA TGCTCGGCGC CCCGTTCGCC TTCGTCATGG CGATGGACGA CGGGCGTTCC
TACTGGAAGT CCCGTGCGGG TACGGCGGCG GGCGACCTCA CCGGTCGGCA GATCGCAGCG
GCAGACAGCC TCTGCCGCCT GGCGGTCGGC ACGGGTCTGC CGCTGGTCGT GCCCGATGCC
GGCCGCGACG ATCGCGTCCG GGGCGATTCG CTCGTCCGGT CGGCCGGTAT CAGGGCATGG
GCCAGCTTCC CGCTCCGCGA TCCGAGCGGC CGCACGCTCG GTGCCTTCGG AGCGGCCGAC
GTCCGCCCCC GGCTCTGGAC GGCCCGTGAC CTCGAGCTGC TGGAGACCCT CGCCCAGGCC
GTGTCGGGCG AGATCGCGCT GCGTCACGTC GCGGCGGCCG CGACCGCGCT GGCCCGGACT
CTCCAGCAGA GCCTCCTCCC CCCGGAGGTT CCGGAGATCC CCGGCCTGGA GGTCTCGGCC
CGTTACCGCC CGGCGGGCGA AGGCGCCGAG GTCCTGGGCG ATTTCTTCGA CGTGTTCCAG
ACCGGCCGTA CCAGTTTCGG CGTGGTTCTG GGCGATGTCG CCGGCAAGGG GGTCGAGGCG
GCCAAGGTGA CCGCGCTGGC GCACTACACC ATCCGGGCGG CGGCGAGTCG CACCCGTGAT
CCGGCCGCCA TTCTGAACCA GCTCAACCGG GCGCTGCTCA CCCAACATCC CGACAGCGAA
CGGTTCCTCA CCGTCGCATA CATGGCCGTG GACCGGTCCC GGCGAAATCG GACCCTGGCC
CTCTGTTCGG CCGGGCACAC TCCCGTTCTG CTCCGTGGGC GCGACGGCAC GGTGACCCCC
ATCGGCTCCC ACGGCCTGGT GCTCGGCGTC TTCGAGGACC CGGAGCTCAC CACCAGCCGG
CCGAGATTCG GTCCCGGTGA CACCATCCTG CTCTACACGG ACGGCGTCAC CGAGGCCCGC
CGTGGGAACG ACCAGTACGG CGATGATCGG CTGCGGGCGC TGCTCGCGGC CACCGATCCG
GCCGCCGGCC GCCTCACCGC GACGATCGAG GCGGCGGTGC TTGATTTTGC CGACGGGCCG
CCCCAGGACG ATATTGCCAT CCTCGCAATC CACTTCCCGG ATATCTCGTC CGTGGCGATG
AAAACGGTCC GTTCGAGGCT GCGGTCCCGG CGGCGACCAC GGCGGCCGTT CACGCGCCGT
GGCACGCCGA CCGTGTGA
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| Protein sequence | MDNAPAPEGT GPARDAGPDQ AASVLLRAEP EEPFDRLTRL AAVMLGAPFA FVMAMDDGRS
YWKSRAGTAA GDLTGRQIAA ADSLCRLAVG TGLPLVVPDA GRDDRVRGDS LVRSAGIRAW
ASFPLRDPSG RTLGAFGAAD VRPRLWTARD LELLETLAQA VSGEIALRHV AAAATALART
LQQSLLPPEV PEIPGLEVSA RYRPAGEGAE VLGDFFDVFQ TGRTSFGVVL GDVAGKGVEA
AKVTALAHYT IRAAASRTRD PAAILNQLNR ALLTQHPDSE RFLTVAYMAV DRSRRNRTLA
LCSAGHTPVL LRGRDGTVTP IGSHGLVLGV FEDPELTTSR PRFGPGDTIL LYTDGVTEAR
RGNDQYGDDR LRALLAATDP AAGRLTATIE AAVLDFADGP PQDDIAILAI HFPDISSVAM
KTVRSRLRSR RRPRRPFTRR GTPTV
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